Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   M4D82_RS24745 Genome accession   NZ_CP097322
Coordinates   5329544..5330335 (-) Length   263 a.a.
NCBI ID   WP_249768119.1    Uniprot ID   -
Organism   Streptomyces sp. RerS4     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5324544..5335335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M4D82_RS24730 (M4D82_24730) - 5324784..5326547 (+) 1764 WP_249772129.1 IucA/IucC family protein -
  M4D82_RS24735 (M4D82_24735) - 5326578..5327252 (+) 675 WP_249768117.1 GNAT family N-acetyltransferase -
  M4D82_RS24740 (M4D82_24740) - 5327457..5329451 (+) 1995 WP_249768118.1 ATP-dependent DNA helicase -
  M4D82_RS24745 (M4D82_24745) dinR/lexA 5329544..5330335 (-) 792 WP_249768119.1 transcriptional repressor LexA Regulator
  M4D82_RS24750 (M4D82_24750) nrdR 5330808..5331323 (+) 516 WP_249768120.1 transcriptional regulator NrdR -
  M4D82_RS24755 (M4D82_24755) - 5331455..5334343 (+) 2889 WP_249768121.1 vitamin B12-dependent ribonucleotide reductase -
  M4D82_RS24760 (M4D82_24760) - 5334485..5335324 (+) 840 WP_249768122.1 arylamine N-acetyltransferase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 28465.18 Da        Isoelectric Point: 7.4238

>NTDB_id=594316 M4D82_RS24745 WP_249768119.1 5329544..5330335(-) (dinR/lexA) [Streptomyces sp. RerS4]
MTTTADSATITAQNRSQSRLEPVHAMNDAGQNPEADTVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPP
SMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAEE
SVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNA
AYQPIPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 792 bp        

>NTDB_id=594316 M4D82_RS24745 WP_249768119.1 5329544..5330335(-) (dinR/lexA) [Streptomyces sp. RerS4]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGAACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCATGAA
TGACGCAGGTCAGAACCCGGAGGCGGACACCGTACGCCCCGCTCGCTCGCTGCCAGGTCGACCTCCAGGCATCCGCGCCG
ACAGCTCCGGGCTCACGGACCGGCAGCGGAGGGTCATCGAGGTCATCCGGGACTCCGTGCAGCGGCGGGGCTACCCGCCG
TCGATGCGGGAGATCGGCCAGGCCGTCGGCCTCTCCAGCACCTCGTCCGTGGCGCACCAGCTCATGGCGCTGGAGCGCAA
GGGCTTCCTGCGCCGCGACCCGCACCGCCCCCGCGCCTACGAGGTCCGCGGCTCCGACCAGCCCAGCTCGCAGCCGACCG
ACACCACCGGCAAGCCCGCGGCCTCCTACGTGCCCCTGGTCGGTCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAGGAG
TCCGTCGAGGACGTCTTCCCGCTCCCCCGCCAGCTGGTCGGTGACGGTGAGCTCTTCGTCCTGAAGGTCGTCGGCGATTC
GATGATCGAGGCGGCGATCTGTGACGGCGACTGGGTCACCGTCCGCCGTCAGCCCGTCGCGGAGAACGGCGACATCGTCG
CCGCGATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTGTGGCTGCTCCCGCACAATGCC
GCCTACCAGCCGATCCCCGGTGACGACGCCACCATCCTCGGCAAGGTCGTCGCGGTACTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(145-257)

LexA DNA binding domain (LexA_DNA_bind)

(56-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.608

0.376