Detailed information NTG0594110

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: M3N36_RS04960
• Genome accession: NZ_CP097251
• Coordinates: 958932..960002 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 953932..965002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M3N36_RS04940 (M3N36_04940)	citX	954523..955101 (+)	579	WP_249453242.1	citrate lyase holo-[acyl-carrier protein] synthase	-
M3N36_RS04945 (M3N36_04945)	-	955116..956498 (+)	1383	WP_174140249.1	oxaloacetate decarboxylase subunit alpha	-
M3N36_RS04950 (M3N36_04950)	citC	956608..957660 (-)	1053	WP_174140250.1	[citrate (pro-3S)-lyase] ligase	-
M3N36_RS04955 (M3N36_04955)	-	957749..958231 (-)	483	WP_030127242.1	PASTA domain-containing protein	-
M3N36_RS04960 (M3N36_04960)	xerS	958932..960002 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
M3N36_RS04965 (M3N36_04965)	-	960471..961169 (+)	699	WP_002993300.1	S24 family peptidase	-
M3N36_RS04970 (M3N36_04970)	ffh	961304..962866 (-)	1563	WP_030127241.1	signal recognition particle protein	-
M3N36_RS04975 (M3N36_04975)	-	962881..963213 (-)	333	WP_002989745.1	putative DNA-binding protein	-
M3N36_RS04980 (M3N36_04980)	-	963311..964009 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=594110 M3N36_RS04960 WP_002984598.1 958932..960002(-) (xerS) [Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=594110 M3N36_RS04960 WP_002984598.1 958932..960002(-) (xerS) [Streptococcus pyogenes strain 21SPY7071 isolate cerebral abscess]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806