Detailed information NTG0059405

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J61_RS02570
• Genome accession: NZ_AP018769
• Coordinates: 522764..523762 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-6 isolate 12H01
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 517764..528762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J61_RS02545 (CHBNII6_04760)	tehA	518732..519676 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J61_RS02550 (CHBNII6_04770)	tsaA	519729..520448 (-)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J61_RS02555 (CHBNII6_04780)	menA	520510..521427 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J61_RS02560 (CHBNII6_04790)	rraA	521479..521967 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J61_RS02565 (CHBNII6_04800)	-	522107..522658 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J61_RS02570 (CHBNII6_04810)	cytR	522764..523762 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
K6J61_RS02575 (CHBNII6_04820)	rbsK	523790..524710 (-)	921	WP_011272090.1	ribokinase	-
K6J61_RS02580 (CHBNII6_04830)	rbsB	524808..525686 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J61_RS02585 (CHBNII6_04840)	rbsC	525706..526674 (-)	969	WP_162686842.1	ribose ABC transporter permease	-
K6J61_RS02590 (CHBNII6_04850)	rbsA	526690..528171 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J61_RS02595 (CHBNII6_04860)	rbsD	528185..528604 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=59405 K6J61_RS02570 WP_005659739.1 522764..523762(-) (cytR) [Haemophilus influenzae strain CHBN-II-6 isolate 12H01]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59405 K6J61_RS02570 WP_005659739.1 522764..523762(-) (cytR) [Haemophilus influenzae strain CHBN-II-6 isolate 12H01]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361