Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   JMO07_RS13080 Genome accession   NZ_CP080564
Coordinates   2655934..2656821 (-) Length   295 a.a.
NCBI ID   WP_000143420.1    Uniprot ID   A0A2S6DP21
Organism   Staphylococcus aureus strain HL16278     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2650934..2661821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMO07_RS13050 (JMO07_002615) - 2650952..2651044 (+) 93 WP_010956583.1 hypothetical protein -
  JMO07_RS13055 (JMO07_002616) - 2651152..2651649 (-) 498 WP_001065269.1 glutathione peroxidase -
  JMO07_RS13060 (JMO07_002617) - 2651659..2651919 (-) 261 WP_001789910.1 hypothetical protein -
  JMO07_RS13065 (JMO07_002618) - 2652301..2652414 (-) 114 Protein_2557 hypothetical protein -
  JMO07_RS13070 (JMO07_002619) - 2653073..2655073 (-) 2001 WP_000776739.1 ABC transporter permease -
  JMO07_RS13075 (JMO07_002620) - 2655070..2655825 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  JMO07_RS13080 (JMO07_002621) braS 2655934..2656821 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  JMO07_RS13085 (JMO07_002622) braR 2656832..2657497 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  JMO07_RS13090 (JMO07_002623) - 2657523..2657723 (-) 201 WP_000604727.1 hypothetical protein -
  JMO07_RS13095 (JMO07_002624) - 2657921..2659345 (+) 1425 WP_000953762.1 alkaline phosphatase -
  JMO07_RS13730 - 2659405..2659506 (-) 102 WP_000731972.1 SE2200 family small protein -
  JMO07_RS13105 (JMO07_002626) - 2659628..2660083 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  JMO07_RS13110 (JMO07_002627) - 2660328..2661089 (-) 762 WP_000323447.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=594045 JMO07_RS13080 WP_000143420.1 2655934..2656821(-) (braS) [Staphylococcus aureus strain HL16278]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=594045 JMO07_RS13080 WP_000143420.1 2655934..2656821(-) (braS) [Staphylococcus aureus strain HL16278]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S6DP21

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993