Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   JMO13_RS10330 Genome accession   NZ_CP080551
Coordinates   2082499..2083215 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain HL18840     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2077499..2088215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMO13_RS10300 (JMO13_002061) - 2077715..2078341 (+) 627 WP_000522384.1 nitroreductase family protein -
  JMO13_RS10305 (JMO13_002062) - 2078702..2079487 (+) 786 WP_000867942.1 carbon-nitrogen family hydrolase -
  JMO13_RS14010 hld 2080087..2080167 (-) 81 WP_000046022.1 delta-hemolysin -
  JMO13_RS10315 (JMO13_002064) agrB 2080457..2081026 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  JMO13_RS10320 (JMO13_002065) agrD 2081023..2081163 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  JMO13_RS10325 (JMO13_002066) agrC 2081188..2082480 (+) 1293 WP_001789596.1 quorum-sensing sensor histidine kinase AgrC -
  JMO13_RS10330 (JMO13_002067) agrA 2082499..2083215 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  JMO13_RS10335 (JMO13_002068) - 2083287..2083396 (+) 110 Protein_2015 hypothetical protein -
  JMO13_RS10340 (JMO13_002069) - 2083584..2084543 (-) 960 WP_001253305.1 carbohydrate kinase -
  JMO13_RS10345 (JMO13_002070) - 2084540..2086024 (-) 1485 WP_000141430.1 sucrose-6-phosphate hydrolase -
  JMO13_RS10350 (JMO13_002071) - 2086173..2087123 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=593779 JMO13_RS10330 WP_000688492.1 2082499..2083215(+) (agrA) [Staphylococcus aureus strain HL18840]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=593779 JMO13_RS10330 WP_000688492.1 2082499..2083215(+) (agrA) [Staphylococcus aureus strain HL18840]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGCGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1