Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   M2M89_RS09525 Genome accession   NZ_CP097130
Coordinates   1896739..1897356 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain S16     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1891739..1902356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS09495 yndJ 1892056..1893696 (+) 1641 WP_038827863.1 YndJ family protein -
  M2M89_RS09500 - 1893786..1894100 (+) 315 WP_166668700.1 hypothetical protein -
  M2M89_RS09505 pghL 1894324..1895082 (+) 759 WP_041850786.1 gamma-polyglutamate hydrolase PghL -
  M2M89_RS09510 - 1895109..1895558 (-) 450 WP_015483284.1 YndM family protein -
  M2M89_RS09515 fosM 1895767..1896201 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  M2M89_RS09520 - 1896110..1896387 (+) 278 Protein_1826 hypothetical protein -
  M2M89_RS09525 dinR/lexA 1896739..1897356 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  M2M89_RS09530 yneA 1897506..1897823 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  M2M89_RS09535 dinL 1897842..1898495 (+) 654 WP_041850785.1 recombinase family protein -
  M2M89_RS09540 ynzC 1898559..1898792 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  M2M89_RS09545 recP/tkt 1898961..1900964 (+) 2004 WP_003231593.1 transketolase Machinery gene
  M2M89_RS09550 sirA 1901117..1901563 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  M2M89_RS09555 yneF 1901649..1901867 (+) 219 WP_003221221.1 YneF family protein -
  M2M89_RS09560 ynzD 1901941..1902114 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=593666 M2M89_RS09525 WP_003238209.1 1896739..1897356(-) (dinR/lexA) [Bacillus subtilis strain S16]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=593666 M2M89_RS09525 WP_003238209.1 1896739..1897356(-) (dinR/lexA) [Bacillus subtilis strain S16]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1