Detailed information NTG0593652

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: M2M89_RS08045
• Genome accession: NZ_CP097130
• Coordinates: 1544285..1545310 (+)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain S16
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1539285..1550310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2M89_RS08010	ylbE	1539585..1539824 (+)	240	WP_003232231.1	YlbE-like family protein	-
M2M89_RS08015	ylbF	1539940..1540389 (+)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
M2M89_RS08020	ylbG	1540444..1540716 (+)	273	WP_015715839.1	YlbG family protein	-
M2M89_RS08025	rsmD	1541039..1541593 (+)	555	WP_029317761.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
M2M89_RS08030	coaD	1541598..1542083 (+)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
M2M89_RS08035	spoVV	1542094..1543320 (-)	1227	WP_015252149.1	dipicolinic acid transporter SpoVV	-
M2M89_RS08040	ylbK	1543501..1544283 (+)	783	WP_003232221.1	patatin family protein	-
M2M89_RS08045	sepM	1544285..1545310 (+)	1026	WP_003245451.1	protease DdcP	Regulator
M2M89_RS08050	ylbM	1545327..1546574 (-)	1248	WP_128441609.1	nucleotidyltransferase	-
M2M89_RS08055	-	1546571..1546756 (-)	186	WP_003232215.1	hypothetical protein	-
M2M89_RS08060	ylbN	1546784..1547302 (+)	519	WP_014479718.1	DUF177 domain-containing protein	-
M2M89_RS08065	rpmF	1547324..1547503 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
M2M89_RS08070	gerR	1547648..1548229 (+)	582	WP_015383592.1	sporulation specific transcriptional regulator GerR	-
M2M89_RS08075	ylbP	1548286..1548768 (-)	483	WP_014476736.1	N-acetyltransferase	-
M2M89_RS08080	-	1548928..1549824 (+)	897	WP_128441611.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=593652 M2M89_RS08045 WP_003245451.1 1544285..1545310(+) (sepM) [Bacillus subtilis strain S16]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=593652 M2M89_RS08045 WP_003245451.1 1544285..1545310(+) (sepM) [Bacillus subtilis strain S16]
TTGCTACGAAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
TGGGAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCTGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402