Detailed information NTG0593642

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: M2M89_RS06640
• Genome accession: NZ_CP097130
• Coordinates: 1286707..1287843 (+)
• Length: 378 a.a.
• NCBI ID: WP_015252291.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain S16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1281707..1292843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2M89_RS06620	uxaA	1282155..1283648 (+)	1494	WP_103803759.1	altronate dehydratase family protein	-
M2M89_RS06625	yjnA	1283689..1284453 (-)	765	WP_014476525.1	sulfite exporter TauE/SafE family protein	-
M2M89_RS06630	yjoA	1284678..1285142 (-)	465	WP_014479541.1	DinB family protein	-
M2M89_RS06635	yjoB	1285291..1286562 (+)	1272	WP_128441566.1	ATPase YjoB	-
M2M89_RS06640	rapC	1286707..1287843 (+)	1137	WP_015252291.1	response regulator aspartate phosphatase RapA	Regulator
M2M89_RS06645	phrA	1287833..1287967 (+)	135	WP_003245487.1	phosphatase RapA inhibitor PhrA	-
M2M89_RS06650	yjpA	1287998..1288255 (-)	258	WP_003232731.1	YciI family protein	-
M2M89_RS06655	xlyB	1288376..1289329 (+)	954	WP_041850941.1	N-acetylmuramoyl-L-alanine amidase	-
M2M89_RS06660	yjqA	1289369..1289746 (-)	378	WP_041850940.1	PH domain-containing protein	-
M2M89_RS06665	pghB	1289851..1290453 (+)	603	WP_038828723.1	poly-gamma-glutamate hydrolase family protein	-
M2M89_RS06670	xpdC	1290530..1291366 (+)	837	WP_003245071.1	manganese catalase family protein	-
M2M89_RS06675	xkdA	1291410..1292006 (-)	597	WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	-
M2M89_RS06680	xre	1292169..1292510 (-)	342	WP_003232719.1	HTH-type transcriptional regulator Xre	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45046.23 Da
• Isoelectric Point: 4.7218

>NTDB_id=593642 M2M89_RS06640 WP_015252291.1 1286707..1287843(+) (rapC) [Bacillus subtilis strain S16]
MRMKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPFGEDTSQLE
FSELLEDIEGNQYKLTGLLEYYFNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQK
AAEYFEKSVSICKSEKFDNLPHSIYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELFVELFQFLHALYGKNIDTESVS
HTFQFLEEHMLYPYIEELAHDAAQFYIENGQPEKALSFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=593642 M2M89_RS06640 WP_015252291.1 1286707..1287843(+) (rapC) [Bacillus subtilis strain S16]
TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAATGAATGGTATACTCATATCCGGCAGTTCCA
CGTCGCTGAAGCCGAACGGGTCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGATTTGCTGCTGT
ATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGATTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAG
TTTTCAGAATTATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAATATTACTTTAATTTTTTTCG
AGGAATGTATGAATTTAAGCAGAAGATGTTTGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG
TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCTGAGATTTTTTACAATTTAAAACAAACCTATGTTTCG
ATGAGCTACGCCGTTCAGGCATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGA
AAGAAGGCAATCCCCGCCTGATCAGTTCCGCCCTGTATAATCTCGGAAACTGCTATGAGAAAATGGGTGAACTGCAAAAG
GCAGCCGAATACTTTGAGAAATCTGTTTCTATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT
AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGTATCGTGAAGGATTGGAAATCGCCCGTCAAT
ACAGTGATGAATTATTTGTGGAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGAATCGGTCTCA
CACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTTATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATAT
AGAAAACGGACAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAAACAAATCCAGAGAGGAGATT
GTTTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.947	99.471	0.447
rapF	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.418