Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KTJ85_RS19425 Genome accession   NZ_CP080509
Coordinates   342159..342323 (+) Length   54 a.a.
NCBI ID   WP_269387144.1    Uniprot ID   -
Organism   Bacillus sp. 7D3     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 337159..347323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTJ85_RS19420 srfAB 339104..342094 (+) 2991 Protein_317 surfactin non-ribosomal peptide synthetase SrfAB -
  KTJ85_RS19425 comS 342159..342323 (+) 165 WP_269387144.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6236.25 Da        Isoelectric Point: 12.3302

>NTDB_id=593433 KTJ85_RS19425 WP_269387144.1 342159..342323(+) (comS) [Bacillus sp. 7D3]
MRARRSSSLNRSDKRLIRSIILFPQHNAGCISSISLGRPARATTSLLYFCWRDR

Nucleotide


Download         Length: 165 bp        

>NTDB_id=593433 KTJ85_RS19425 WP_269387144.1 342159..342323(+) (comS) [Bacillus sp. 7D3]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAA
CGCAGGATGTATATCCTCAATCAGCTTGGGCAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGATC
GGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

60.87

85.185

0.519