Detailed information NTG0593429

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KTJ85_RS17770
• Genome accession: NZ_CP080509
• Coordinates: 3483933..3485078 (+)
• Length: 381 a.a.
• NCBI ID: WP_212099667.1
• Uniprot ID: -
• Organism: Bacillus sp. 7D3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3478933..3490078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTJ85_RS17750 (KTJ85_17750)	argS	3479576..3481246 (-)	1671	WP_065982573.1	arginine--tRNA ligase	-
KTJ85_RS17755 (KTJ85_17755)	-	3481243..3481671 (-)	429	WP_212099662.1	DUF1934 domain-containing protein	-
KTJ85_RS17760 (KTJ85_17760)	-	3481824..3482303 (+)	480	Protein_3515	bacteriocin biosynthesis protein AlbG	-
KTJ85_RS17765 (KTJ85_17765)	-	3482309..3483703 (-)	1395	WP_212099664.1	YncE family protein	-
KTJ85_RS17770 (KTJ85_17770)	rapF	3483933..3485078 (+)	1146	WP_212099667.1	tetratricopeptide repeat protein	Regulator
KTJ85_RS17775 (KTJ85_17775)	-	3485062..3485181 (+)	120	WP_115996635.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
KTJ85_RS17780 (KTJ85_17780)	speB	3485315..3486187 (-)	873	WP_065522437.1	agmatinase	-
KTJ85_RS17785 (KTJ85_17785)	speE	3486246..3487076 (-)	831	WP_013353957.1	spermidine synthase	-
KTJ85_RS17790 (KTJ85_17790)	-	3487276..3489348 (+)	2073	WP_212099672.1	transglycosylase domain-containing protein	-
KTJ85_RS17795 (KTJ85_17795)	-	3489373..3489810 (-)	438	WP_212099675.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45726.04 Da
• Isoelectric Point: 5.0586

>NTDB_id=593429 KTJ85_RS17770 WP_212099667.1 3483933..3485078(+) (rapF) [Bacillus sp. 7D3]
MASVVSSSAAGEKINEWYMYIRRFSIPDAEYLRREIKEELEHAEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVTDQIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKNGENYSIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELDQQPQLMGRTLFNIALCHNNQNNKDK
AIPHLKKAIDVFEKAQMIHSLPQPYFLLTQIYYKLENIDNAYDYHKKGVSICKEIDDIIYEEKFKFLEYLYTPNPRDILI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=593429 KTJ85_RS17770 WP_212099667.1 3483933..3485078(+) (rapF) [Bacillus sp. 7D3]
GTGGCGAGTGTTGTATCGTCTTCAGCGGCTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGAGCATGCAGAGGATGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTGGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGCCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCGGAAAGCAAATTGACGTACG
TTACAGATCAGATAGAAAAAGCGGAATTTTACTTTAAGATGTCAGAAGTCTATTACTATATGAAACAAACTTATGTTTCA
ATGGACTATGCGCGGCAAGCTTATTTAATTTATAAAAATGGGGAGAATTATAGCATTAGGTTGACTCAGTGCCATTCTTT
GTTTGGCGCTAATTATCTTGATGTAAAGCAATATGATCATGCGATATCCCACTTTCAAAAAGCATATACGATGGCTGAAC
TGGATCAGCAGCCTCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGATAAA
GCTATTCCTCATTTAAAAAAAGCCATAGATGTTTTTGAAAAAGCTCAAATGATTCACTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTATAAGTTAGAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTGTCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAGAAATTTAAATTTTTGGAATATTTATACACGCCGAATCCAAGAGATATATTAATA
AATGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCTCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_8) (223-251)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.554	100	0.696
rapC	Bacillus subtilis subsp. subtilis str. 168	53.684	99.738	0.535