Detailed information NTG0059342

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J56_RS02580
• Genome accession: NZ_AP018768
• Coordinates: 519518..520516 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-5 isolate 13H40
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 514518..525516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J56_RS02555 (CHBNII5_04780)	tehA	515486..516430 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J56_RS02560 (CHBNII5_04790)	tsaA	516483..517202 (-)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J56_RS02565 (CHBNII5_04800)	menA	517264..518181 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J56_RS02570 (CHBNII5_04810)	rraA	518233..518721 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J56_RS02575 (CHBNII5_04820)	-	518861..519412 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J56_RS02580 (CHBNII5_04830)	cytR	519518..520516 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
K6J56_RS02585 (CHBNII5_04840)	rbsK	520544..521464 (-)	921	WP_011272090.1	ribokinase	-
K6J56_RS02590 (CHBNII5_04850)	rbsB	521562..522440 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J56_RS02595 (CHBNII5_04860)	rbsC	522460..523428 (-)	969	WP_044364743.1	ribose ABC transporter permease	-
K6J56_RS02600 (CHBNII5_04870)	rbsA	523444..524925 (-)	1482	WP_044364746.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J56_RS02605 (CHBNII5_04880)	rbsD	524939..525358 (-)	420	WP_005693672.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=59342 K6J56_RS02580 WP_005659739.1 519518..520516(-) (cytR) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59342 K6J56_RS02580 WP_005659739.1 519518..520516(-) (cytR) [Haemophilus influenzae strain CHBN-II-5 isolate 13H40]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361