Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KTJ85_RS00500 | Genome accession | NZ_CP080509 |
| Coordinates | 85211..87646 (+) | Length | 811 a.a. |
| NCBI ID | WP_013350791.1 | Uniprot ID | - |
| Organism | Bacillus sp. 7D3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 80211..92646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KTJ85_RS00485 (KTJ85_00485) | ctsR | 83088..83552 (+) | 465 | WP_003156396.1 | transcriptional regulator CtsR | - |
| KTJ85_RS00490 (KTJ85_00490) | - | 83566..84123 (+) | 558 | WP_212101610.1 | UvrB/UvrC motif-containing protein | - |
| KTJ85_RS00495 (KTJ85_00495) | - | 84123..85214 (+) | 1092 | WP_013350790.1 | protein arginine kinase | - |
| KTJ85_RS00500 (KTJ85_00500) | clpC | 85211..87646 (+) | 2436 | WP_013350791.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| KTJ85_RS00505 (KTJ85_00505) | radA | 87740..89119 (+) | 1380 | WP_065980549.1 | DNA repair protein RadA | Machinery gene |
| KTJ85_RS00510 (KTJ85_00510) | disA | 89123..90205 (+) | 1083 | WP_014469611.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| KTJ85_RS00515 (KTJ85_00515) | - | 90319..91419 (+) | 1101 | WP_013350794.1 | PIN/TRAM domain-containing protein | - |
| KTJ85_RS00520 (KTJ85_00520) | ispD | 91433..92131 (+) | 699 | WP_212101613.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| KTJ85_RS00525 (KTJ85_00525) | ispF | 92124..92600 (+) | 477 | WP_013350796.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90178.61 Da Isoelectric Point: 5.7566
>NTDB_id=593361 KTJ85_RS00500 WP_013350791.1 85211..87646(+) (clpC) [Bacillus sp. 7D3]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGTSGAGTNSSAN
TPTLDSLARDLTAIAREDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTN
Nucleotide
Download Length: 2436 bp
>NTDB_id=593361 KTJ85_RS00500 WP_013350791.1 85211..87646(+) (clpC) [Bacillus sp. 7D3]
ATGATGTTTGGAAGATTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCCTTAGAAGCGCTGG
GCCTCAATTCAGATAAAATGCAAAAAGAAGTGGAAAGTTTGATTGGTCGAGGACAGGAAAGCACCACATCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAAGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTAGGACATTCTTATGTAGGAACAGA
ACACATACTTCTCGGGCTGATTCGTGAAGGTGAGGGAGTTGCCGCTAGGGTTTTAAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAAGTTCTGCAGCTTCTCGGAAGCAATGAAACAGGGACATCTGGAGCCGGGACAAATAGCAGTGCAAAT
ACTCCGACGCTTGACAGCCTTGCTCGTGATTTAACCGCAATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGGGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAACCCCGTTCTTATTGGAGAACCCGGTGTAG
GTAAAACTGCGATTGCCGAAGGCCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACGTTAGATATGGGAACGGTTGTAGCCGGCACGAAATATCGCGGAGAATTTGAAGACCGCTTGAAAAAGGTAATGGA
CGAAATACGTCAGGCCGGCAATATCATTTTATTCATTGATGAACTGCATACACTGATCGGAGCGGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA
TATCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGTTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCCGACCGTTATATATCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCGGGT
TCAAAAGTGCGCCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAATTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGATACGAAAAAAACTTGGAAAGAAAAACAAGGCCAAGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTT
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCACTCCCGTGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCAAAGGCTGTGAGACGTGCAAGAGCCGGTCTGAAGG
ATCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGAAAGACAGAGCTGGCAAGAGCACTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACATTCGACTTCACGCCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGTCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCTTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATCCTGATTATGACGTCAAATGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTCGGCTTCAATGTTCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTGATGGGAGAGC
TGAAGCGTGCCTTCAGGCCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACAGAAGC
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATCCAAAAGCATG
TGGAGGACCGTTTATCAGAAGAGCTCCTCAGAGGCAATATTGATAAAGGGCAGCACATCGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
ATGATGTTTGGAAGATTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATATTATTGGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCCTTAGAAGCGCTGG
GCCTCAATTCAGATAAAATGCAAAAAGAAGTGGAAAGTTTGATTGGTCGAGGACAGGAAAGCACCACATCTGTCCCTCAT
TACACGCCTCGAGCCAAAAAAGTAATAGAACTATCAATGGATGAAGCCAGAAAGCTAGGACATTCTTATGTAGGAACAGA
ACACATACTTCTCGGGCTGATTCGTGAAGGTGAGGGAGTTGCCGCTAGGGTTTTAAATAATCTGGGTGTCAGTCTCAATA
AGGCGAGACAGCAAGTTCTGCAGCTTCTCGGAAGCAATGAAACAGGGACATCTGGAGCCGGGACAAATAGCAGTGCAAAT
ACTCCGACGCTTGACAGCCTTGCTCGTGATTTAACCGCAATTGCGAGGGAAGACAGCCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGGGTTATTGAGGTATTAAGCCGCAGAACAAAGAATAACCCCGTTCTTATTGGAGAACCCGGTGTAG
GTAAAACTGCGATTGCCGAAGGCCTCGCACAGCAGATCATCAACAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACGTTAGATATGGGAACGGTTGTAGCCGGCACGAAATATCGCGGAGAATTTGAAGACCGCTTGAAAAAGGTAATGGA
CGAAATACGTCAGGCCGGCAATATCATTTTATTCATTGATGAACTGCATACACTGATCGGAGCGGGAGGAGCAGAAGGTG
CGATTGACGCGTCGAATATTTTAAAACCTTCACTCGCTCGCGGAGAGCTTCAGTGCATCGGTGCGACAACGCTTGATGAA
TATCGCAAATATATCGAAAAAGACGCAGCTCTGGAGCGCCGTTTCCAGCCGATTCAGGTGGATGAGCCGTCAGTCGATGA
AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAAGCGCATCACCGCGTATCCATTACCGATGAAGCGATCGAAG
CGGCGGTTAAATTGTCCGACCGTTATATATCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGACGAAGCGGGT
TCAAAAGTGCGCCTCCGTTCTTTCACAACGCCTCCGAACTTAAAAGAGCTTGAGCAGAAGCTTGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAAAGCCAGGAATTTGAAAAAGCGGCTTCTCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGATACGAAAAAAACTTGGAAAGAAAAACAAGGCCAAGAGAACTCCGAAGTTTCTGTAGAGGATATCGCAATGGTT
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCGCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCT
GCACTCCCGTGTCATTGGCCAGGATGAAGCCGTTGTAGCCGTTGCAAAGGCTGTGAGACGTGCAAGAGCCGGTCTGAAGG
ATCCGAAACGTCCGATTGGTTCATTCATCTTCTTAGGCCCTACAGGCGTAGGAAAGACAGAGCTGGCAAGAGCACTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACATTCGACTTCACGCCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGTCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCATCCTGATGTGTTTAACATTCTCTTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTTGATTTCCGCAACACGATCCTGATTATGACGTCAAATGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTCGGCTTCAATGTTCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTGATGGGAGAGC
TGAAGCGTGCCTTCAGGCCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACATCTT
ACAGACATCGTGTCGCTTATGTCTGACCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATAGAGCTGACAGAAGC
TGCAAAAGCAAAAGTAGCAGACGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATCCAAAAGCATG
TGGAGGACCGTTTATCAGAAGAGCTCCTCAGAGGCAATATTGATAAAGGGCAGCACATCGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.301 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.689 |
99.014 |
0.492 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.47 |
| clpC | Streptococcus mutans UA159 |
44.632 |
100 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae Rx1 |
45.264 |
100 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.141 |
100 |
0.453 |
| clpE | Streptococcus mutans UA159 |
53.775 |
80.025 |
0.43 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.417 |
81.628 |
0.428 |
| clpE | Streptococcus pneumoniae Rx1 |
52.417 |
81.628 |
0.428 |
| clpE | Streptococcus pneumoniae D39 |
52.417 |
81.628 |
0.428 |
| clpE | Streptococcus pneumoniae R6 |
52.417 |
81.628 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.291 |
84.834 |
0.427 |