Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   K0V03_RS18950 Genome accession   NZ_CP080508
Coordinates   3547865..3548449 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain HD15     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3542865..3553449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS18920 (K0V03_18920) dapD 3543052..3543762 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  K0V03_RS18925 (K0V03_18925) dapI 3543832..3544956 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  K0V03_RS18930 (K0V03_18930) ykuS 3545018..3545263 (+) 246 WP_003232382.1 YkuS family protein -
  K0V03_RS18935 (K0V03_18935) mscT 3545300..3546103 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  K0V03_RS18940 (K0V03_18940) ahpA 3546340..3546882 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  K0V03_RS18945 (K0V03_18945) ykuV 3546953..3547399 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  K0V03_RS18950 (K0V03_18950) rok 3547865..3548449 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  K0V03_RS18955 (K0V03_18955) cse15 3548490..3549455 (-) 966 WP_085186130.1 spore protein Cse15 -
  K0V03_RS18960 (K0V03_18960) mobA 3549592..3550191 (+) 600 WP_064671331.1 molybdenum cofactor guanylyltransferase -
  K0V03_RS18965 (K0V03_18965) moeB 3550242..3551261 (+) 1020 WP_085186128.1 molybdopterin-synthase adenylyltransferase MoeB -
  K0V03_RS18970 (K0V03_18970) glp 3551279..3552571 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  K0V03_RS18975 (K0V03_18975) mobB 3552532..3553053 (+) 522 WP_032725609.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=593351 K0V03_RS18950 WP_014113628.1 3547865..3548449(+) (rok) [Bacillus subtilis strain HD15]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=593351 K0V03_RS18950 WP_014113628.1 3547865..3548449(+) (rok) [Bacillus subtilis strain HD15]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974