Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K0V03_RS18850 Genome accession   NZ_CP080508
Coordinates   3532020..3532484 (-) Length   154 a.a.
NCBI ID   WP_085186138.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3527020..3537484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS18830 (K0V03_18830) kinA 3527487..3529307 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  K0V03_RS18835 (K0V03_18835) dapX 3529317..3530498 (-) 1182 WP_014476653.1 aminotransferase A -
  K0V03_RS18840 (K0V03_18840) - 3530700..3530861 (-) 162 WP_003245246.1 hypothetical protein -
  K0V03_RS18845 (K0V03_18845) cheV 3531065..3531976 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  K0V03_RS18850 (K0V03_18850) kre 3532020..3532484 (-) 465 WP_085186138.1 YkyB family protein Regulator
  K0V03_RS18855 (K0V03_18855) ykuC 3532610..3533902 (-) 1293 WP_085186136.1 MFS transporter -
  K0V03_RS18860 (K0V03_18860) ltdD 3533978..3534472 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  K0V03_RS18865 (K0V03_18865) ppeE 3534529..3535389 (-) 861 WP_003232400.1 metallophosphoesterase -
  K0V03_RS18870 (K0V03_18870) fadH 3535532..3536296 (+) 765 WP_072174090.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17923.76 Da        Isoelectric Point: 10.4207

>NTDB_id=593350 K0V03_RS18850 WP_085186138.1 3532020..3532484(-) (kre) [Bacillus subtilis strain HD15]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRRQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=593350 K0V03_RS18850 WP_085186138.1 3532020..3532484(-) (kre) [Bacillus subtilis strain HD15]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCGGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994