Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   K0V03_RS17305 Genome accession   NZ_CP080508
Coordinates   3257299..3258420 (+) Length   373 a.a.
NCBI ID   WP_250621656.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3252299..3263420
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS17270 (K0V03_17270) yjbB 3252938..3254155 (+) 1218 WP_085186279.1 MFS transporter -
  K0V03_RS17275 (K0V03_17275) yjbC 3254319..3254897 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  K0V03_RS17280 (K0V03_17280) spx 3255078..3255473 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  K0V03_RS17285 (K0V03_17285) yjbE 3255519..3256175 (-) 657 WP_003232944.1 TerC family protein -
  K0V03_RS17290 (K0V03_17290) - 3256345..3256485 (+) 141 WP_119122854.1 hypothetical protein -
  K0V03_RS17295 (K0V03_17295) mecA 3256452..3257108 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  K0V03_RS17300 (K0V03_17300) - 3257103..3257225 (-) 123 WP_003245684.1 hypothetical protein -
  K0V03_RS17305 (K0V03_17305) coiA 3257299..3258420 (+) 1122 WP_250621656.1 competence protein CoiA Machinery gene
  K0V03_RS17310 (K0V03_17310) pepF 3258650..3260479 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  K0V03_RS17315 (K0V03_17315) - 3260517..3260684 (-) 168 WP_003244944.1 hypothetical protein -
  K0V03_RS17320 (K0V03_17320) spxH 3260998..3261897 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  K0V03_RS17325 (K0V03_17325) bhbI 3261894..3262292 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  K0V03_RS17330 (K0V03_17330) cwlQ 3262547..3263281 (-) 735 WP_250621654.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43839.90 Da        Isoelectric Point: 10.0622

>NTDB_id=593346 K0V03_RS17305 WP_250621656.1 3257299..3258420(+) (coiA) [Bacillus subtilis strain HD15]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
REMICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVDDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=593346 K0V03_RS17305 WP_250621656.1 3257299..3258420(+) (coiA) [Bacillus subtilis strain HD15]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGAGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATTAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGATGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGTAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAATTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

100

0.984