Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K0V03_RS15655 Genome accession   NZ_CP080508
Coordinates   2953010..2953804 (+) Length   264 a.a.
NCBI ID   WP_220158510.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2948010..2958804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS15625 (K0V03_15625) sxzA 2948849..2949880 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  K0V03_RS15630 (K0V03_15630) yfhB 2949995..2950876 (+) 882 WP_085187161.1 PhzF family phenazine biosynthesis isomerase -
  K0V03_RS15635 (K0V03_15635) yfhC 2950964..2951548 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  K0V03_RS15640 (K0V03_15640) yfhD 2951587..2951778 (-) 192 WP_003233561.1 YfhD family protein -
  K0V03_RS15645 (K0V03_15645) yfhE 2951845..2951955 (-) 111 WP_003223230.1 YfhE family protein -
  K0V03_RS15650 (K0V03_15650) yfhF 2952010..2952921 (-) 912 WP_085187164.1 TIGR01777 family oxidoreductase -
  K0V03_RS15655 (K0V03_15655) recX 2953010..2953804 (+) 795 WP_220158510.1 recombination regulator RecX Regulator
  K0V03_RS15660 (K0V03_15660) yfhH 2953806..2954120 (+) 315 WP_003244592.1 YfhH family protein -
  K0V03_RS15665 (K0V03_15665) yfhI 2954263..2955456 (+) 1194 WP_003243500.1 MFS transporter -
  K0V03_RS15670 (K0V03_15670) sspK 2955488..2955640 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  K0V03_RS15675 (K0V03_15675) yfhJ 2955765..2956034 (+) 270 WP_003243789.1 YfhJ family protein -
  K0V03_RS15680 (K0V03_15680) yfhK 2956179..2956697 (+) 519 WP_085187167.1 SH3 domain-containing protein -
  K0V03_RS15685 (K0V03_15685) spdL 2956782..2957099 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  K0V03_RS15690 (K0V03_15690) ephM 2957101..2957961 (+) 861 WP_085187170.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30994.20 Da        Isoelectric Point: 6.3753

>NTDB_id=593333 K0V03_RS15655 WP_220158510.1 2953010..2953804(+) (recX) [Bacillus subtilis strain HD15]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYCYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=593333 K0V03_RS15655 WP_220158510.1 2953010..2953804(+) (recX) [Bacillus subtilis strain HD15]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACTGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992