Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   CA347_RS14040 Genome accession   NC_021554
Coordinates   2746683..2747570 (-) Length   295 a.a.
NCBI ID   WP_000143415.1    Uniprot ID   -
Organism   Staphylococcus aureus CA-347     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2741683..2752570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA347_RS14005 - 2741690..2741778 (+) 89 Protein_2681 hypothetical protein -
  CA347_RS14010 (CA347_2697) - 2741886..2742383 (-) 498 WP_001065267.1 glutathione peroxidase -
  CA347_RS14015 - 2742393..2742653 (-) 261 WP_072468805.1 hypothetical protein -
  CA347_RS14020 - 2743035..2743148 (-) 114 WP_072468803.1 hypothetical protein -
  CA347_RS14030 (CA347_2699) - 2743823..2745823 (-) 2001 WP_000776737.1 ABC transporter permease -
  CA347_RS14035 (CA347_2700) - 2745820..2746575 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  CA347_RS14040 (CA347_2701) braS 2746683..2747570 (-) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CA347_RS14045 (CA347_2702) braR 2747581..2748246 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CA347_RS14050 (CA347_2703) - 2748272..2748472 (-) 201 WP_000604722.1 hypothetical protein -
  CA347_RS14060 (CA347_2704) - 2748670..2750094 (+) 1425 WP_000953745.1 alkaline phosphatase -
  CA347_RS15795 - 2750154..2750255 (-) 102 WP_000731972.1 SE2200 family small protein -
  CA347_RS14065 (CA347_2705) - 2750377..2750832 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CA347_RS14070 (CA347_2706) - 2751072..2751833 (-) 762 WP_000323450.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34059.30 Da        Isoelectric Point: 5.6141

>NTDB_id=59333 CA347_RS14040 WP_000143415.1 2746683..2747570(-) (braS) [Staphylococcus aureus CA-347]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKDDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEGDLPK
IFDKGYSGYNGQRQSNSTGIGLFIVKQISNHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=59333 CA347_RS14040 WP_000143415.1 2746683..2747570(-) (braS) [Staphylococcus aureus CA-347]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAGATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCGAATGTTGTGAATCGTGTTCGTCAAGAGGTAATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATAAACAATATTATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGAATCGGTATTAGTGAGGGAGACTTACCTAAA
ATATTCGACAAAGGTTATTCGGGGTATAATGGACAACGTCAAAGTAATTCAACTGGGATTGGCTTATTTATTGTAAAGCA
AATTTCAAATCACACTAATCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

97.966

100

0.98


Multiple sequence alignment