Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   K0V03_RS01195 Genome accession   NZ_CP080508
Coordinates   204540..205343 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain HD15     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 199540..210343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K0V03_RS01170 (K0V03_01170) glpQB 200679..201410 (-) 732 WP_069703866.1 glycerophosphodiester phosphodiesterase -
  K0V03_RS01175 (K0V03_01175) yqiI 201489..202109 (-) 621 WP_077671425.1 N-acetylmuramoyl-L-alanine amidase -
  K0V03_RS01180 (K0V03_01180) - 202129..202425 (-) 297 WP_014480225.1 hypothetical protein -
  K0V03_RS01185 (K0V03_01185) - 202733..202885 (+) 153 WP_122060483.1 hypothetical protein -
  K0V03_RS01190 (K0V03_01190) yqiG 202958..204076 (+) 1119 WP_017696437.1 NADH-dependent flavin oxidoreductase -
  K0V03_RS01195 (K0V03_01195) spo0A 204540..205343 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  K0V03_RS01200 (K0V03_01200) spoIVB 205619..206899 (-) 1281 WP_004398697.1 SpoIVB peptidase -
  K0V03_RS01205 (K0V03_01205) recN 207074..208804 (-) 1731 WP_029726732.1 DNA repair protein RecN Machinery gene
  K0V03_RS01210 (K0V03_01210) argR 208837..209286 (-) 450 WP_021480005.1 arginine repressor ArgR -
  K0V03_RS01215 (K0V03_01215) yqxC 209384..210229 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=593281 K0V03_RS01195 WP_003226427.1 204540..205343(-) (spo0A) [Bacillus subtilis strain HD15]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=593281 K0V03_RS01195 WP_003226427.1 204540..205343(-) (spo0A) [Bacillus subtilis strain HD15]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGCTGTTCGGCTATACCGTC
AGCATGACAAAAGCTAAACCTACCAACAGCGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1