Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K1X80_RS26995 Genome accession   NZ_CP080494
Coordinates   5962504..5962911 (-) Length   135 a.a.
NCBI ID   WP_032858786.1    Uniprot ID   -
Organism   Pseudomonas sp. So3.2b     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5957504..5967911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K1X80_RS26980 (K1X80_26980) - 5959497..5961548 (-) 2052 WP_057960880.1 methyl-accepting chemotaxis protein -
  K1X80_RS26985 (K1X80_26985) - 5961545..5962081 (-) 537 WP_057960881.1 chemotaxis protein CheW -
  K1X80_RS26990 (K1X80_26990) pilH 5962094..5962459 (-) 366 WP_057440367.1 twitching motility response regulator PilH -
  K1X80_RS26995 (K1X80_26995) pilG 5962504..5962911 (-) 408 WP_032858786.1 twitching motility response regulator PilG Regulator
  K1X80_RS27000 (K1X80_27000) gshB 5963150..5964103 (+) 954 WP_029300457.1 glutathione synthase -
  K1X80_RS27005 (K1X80_27005) - 5964181..5965080 (+) 900 WP_115129202.1 energy transducer TonB -
  K1X80_RS27010 (K1X80_27010) - 5965181..5965750 (+) 570 WP_057440369.1 YqgE/AlgH family protein -
  K1X80_RS27015 (K1X80_27015) ruvX 5965750..5966187 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  K1X80_RS27020 (K1X80_27020) pyrR 5966270..5966776 (+) 507 WP_057444186.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  K1X80_RS27025 (K1X80_27025) - 5966801..5967805 (+) 1005 WP_057440370.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14934.46 Da        Isoelectric Point: 7.3843

>NTDB_id=593262 K1X80_RS26995 WP_032858786.1 5962504..5962911(-) (pilG) [Pseudomonas sp. So3.2b]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=593262 K1X80_RS26995 WP_032858786.1 5962504..5962911(-) (pilG) [Pseudomonas sp. So3.2b]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCTGAAACGCTGTT
GAAGAACGTGGGGTGCGAAGTCATCACGGCCATCGACGGTTTTGATGCCCTGGCCAGGATCGTTGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTCAAGAACAACCCGGCGTTCAAG
GCCATTCCGGTGATCATGCTCTCGTCCAGGGACGGCCTGTTCGACAAAGCCAAGGGGCGCATCGTCGGCGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTATGTGCCGGGTTTCGCTGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659