Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CA347_RS07940 | Genome accession | NC_021554 |
| Coordinates | 1627637..1627936 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus CA-347 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1622637..1632936
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA347_RS07915 (CA347_1533) | gcvPA | 1623849..1625195 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CA347_RS07920 (CA347_1534) | gcvT | 1625215..1626306 (-) | 1092 | WP_016528726.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CA347_RS07925 (CA347_1535) | - | 1626465..1626989 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| CA347_RS07930 | - | 1626979..1627125 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CA347_RS07935 (CA347_1536) | comGF | 1627222..1627719 (-) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CA347_RS07940 (CA347_1537) | comGE | 1627637..1627936 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CA347_RS07945 (CA347_1538) | comGD | 1627923..1628369 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CA347_RS07950 (CA347_1539) | comGC | 1628347..1628658 (-) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CA347_RS07955 (CA347_1540) | comGB | 1628672..1629742 (-) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CA347_RS07960 (CA347_1541) | comGA | 1629714..1630688 (-) | 975 | WP_000697223.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CA347_RS07965 (CA347_1542) | - | 1630740..1631363 (-) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| CA347_RS07970 (CA347_1543) | - | 1631360..1631689 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CA347_RS07975 (CA347_1544) | - | 1631689..1632675 (-) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| CA347_RS07980 | - | 1632672..1632875 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=59310 CA347_RS07940 WP_000844413.1 1627637..1627936(-) (comGE) [Staphylococcus aureus CA-347]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=59310 CA347_RS07940 WP_000844413.1 1627637..1627936(-) (comGE) [Staphylococcus aureus CA-347]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |