Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   M2J00_RS10225 Genome accession   NZ_CP096961
Coordinates   2191853..2192209 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain NY13932     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2186853..2197209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2J00_RS10200 (M2J00_10190) fabF 2187065..2188309 (+) 1245 WP_003104132.1 beta-ketoacyl-ACP synthase II -
  M2J00_RS10205 (M2J00_10195) pabC 2188309..2189124 (+) 816 WP_003110198.1 aminodeoxychorismate lyase -
  M2J00_RS10210 (M2J00_10200) mltG 2189130..2190179 (+) 1050 WP_004350892.1 endolytic transglycosylase MltG -
  M2J00_RS10215 (M2J00_10205) tmk 2190208..2190840 (+) 633 WP_003122486.1 dTMP kinase -
  M2J00_RS10220 (M2J00_10210) - 2190833..2191819 (+) 987 WP_124173117.1 DNA polymerase III subunit delta' -
  M2J00_RS10225 (M2J00_10215) pilZ 2191853..2192209 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  M2J00_RS10230 (M2J00_10220) - 2192224..2193000 (+) 777 WP_003091117.1 TatD family hydrolase -
  M2J00_RS10235 (M2J00_10225) - 2193226..2194359 (-) 1134 WP_023102992.1 aminotransferase class V-fold PLP-dependent enzyme -
  M2J00_RS10240 (M2J00_10230) - 2194445..2195083 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  M2J00_RS10245 (M2J00_10235) - 2195233..2196129 (+) 897 WP_023118007.1 radical SAM protein -
  M2J00_RS10250 (M2J00_10240) - 2196194..2196826 (+) 633 WP_023118008.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=592994 M2J00_RS10225 WP_003091119.1 2191853..2192209(+) (pilZ) [Pseudomonas aeruginosa strain NY13932]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=592994 M2J00_RS10225 WP_003091119.1 2191853..2192209(+) (pilZ) [Pseudomonas aeruginosa strain NY13932]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449