Detailed information NTG0592936

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FBMFHHBO_RS08785
• Genome accession: NZ_CP080452
• Coordinates: 1832658..1833359 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain MRSN 56
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1827658..1838359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBMFHHBO_RS08750 (FBMFHHBO_08750)	kdsB	1828181..1828942 (+)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FBMFHHBO_RS08755 (FBMFHHBO_08755)	-	1828954..1829934 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
FBMFHHBO_RS08760 (FBMFHHBO_08760)	-	1829946..1830287 (+)	342	WP_001183027.1	PilZ domain-containing protein	-
FBMFHHBO_RS08765 (FBMFHHBO_08765)	-	1830305..1831078 (+)	774	WP_000497300.1	TatD family hydrolase	-
FBMFHHBO_RS08770 (FBMFHHBO_08770)	-	1831116..1831724 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FBMFHHBO_RS08775 (FBMFHHBO_08775)	-	1831734..1832288 (+)	555	WP_000841373.1	type II secretion system protein	-
FBMFHHBO_RS08780 (FBMFHHBO_08780)	xcpV	1832278..1832658 (+)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
FBMFHHBO_RS08785 (FBMFHHBO_08785)	xcpW	1832658..1833359 (+)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FBMFHHBO_RS08790 (FBMFHHBO_08790)	gspK	1833359..1834318 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
FBMFHHBO_RS08795 (FBMFHHBO_08795)	-	1834548..1835144 (+)	597	WP_000908449.1	6-pyruvoyl trahydropterin synthase family protein	-
FBMFHHBO_RS08800 (FBMFHHBO_08800)	ung	1835195..1835908 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
FBMFHHBO_RS08805 (FBMFHHBO_08805)	-	1835905..1837029 (+)	1125	WP_003114973.1	enoyl-CoA hydratase/isomerase family protein	-
FBMFHHBO_RS08810 (FBMFHHBO_08810)	tadA	1837036..1837539 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
FBMFHHBO_RS08815 (FBMFHHBO_08815)	-	1837609..1838052 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=592936 FBMFHHBO_RS08785 WP_000594579.1 1832658..1833359(+) (xcpW) [Acinetobacter baumannii strain MRSN 56]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=592936 FBMFHHBO_RS08785 WP_000594579.1 1832658..1833359(+) (xcpW) [Acinetobacter baumannii strain MRSN 56]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983