Detailed information NTG0592384

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: KY494_RS13445
• Genome accession: NZ_CP080377
• Coordinates: 2993311..2994369 (+)
• Length: 352 a.a.
• NCBI ID: WP_219891263.1
• Uniprot ID: -
• Organism: Janthinobacterium sp. PAMC25594
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2988311..2999369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KY494_RS13425 (KY494_13425)	-	2988683..2989915 (-)	1233	WP_374197292.1	class I SAM-dependent methyltransferase	-
KY494_RS13430 (KY494_13430)	-	2989912..2990709 (-)	798	WP_219891260.1	DUF1365 domain-containing protein	-
KY494_RS13435 (KY494_13435)	-	2990699..2992012 (-)	1314	WP_219891261.1	NAD(P)/FAD-dependent oxidoreductase	-
KY494_RS13440 (KY494_13440)	-	2992205..2993146 (+)	942	WP_219891262.1	MerR family transcriptional regulator	-
KY494_RS13445 (KY494_13445)	pilA	2993311..2994369 (+)	1059	WP_219891263.1	signal recognition particle-docking protein FtsY	Machinery gene
KY494_RS13450 (KY494_13450)	-	2994378..2995121 (+)	744	WP_219135077.1	cell division ATP-binding protein FtsE	-
KY494_RS13455 (KY494_13455)	ftsX	2995118..2996038 (+)	921	WP_219891264.1	permease-like cell division protein FtsX	-
KY494_RS13460 (KY494_13460)	rpoH	2996449..2997342 (+)	894	WP_375143482.1	RNA polymerase sigma factor RpoH	-
KY494_RS13465 (KY494_13465)	-	2997432..2997698 (-)	267	WP_071079406.1	hypothetical protein	-
KY494_RS13470 (KY494_13470)	-	2997877..2998332 (+)	456	WP_219891266.1	hypothetical protein	-
KY494_RS13475 (KY494_13475)	-	2998396..2999127 (+)	732	WP_219891267.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37380.68 Da
• Isoelectric Point: 6.7513

>NTDB_id=592384 KY494_RS13445 WP_219891263.1 2993311..2994369(+) (pilA) [Janthinobacterium sp. PAMC25594]
MFSFFKKKPIAPEAAPAEPLVLPAATPPAPQPAATPLSGAPAELVPVIVAAEPEKKSWMTRLKAGLSKTSNTLSVLFVGA
KIDDALYEELEAALLMSDAGIDATEFLLTELKKKVKEDKLLDAAAVKAALKVLLIDLLSPLEKRFELGRYKPLVMMISGV
NGAGKTTTIGKLAKHMQSNNQSVLLAAGDTFRAAAREQLMVWGERNNVSVISQESGDPAAVAYDSVQSAKARGIDVVMVD
TAGRLPTQLHLMEELKKIKRVIGKGMEGAPHETLLVIDGNTGQNALTQVKAFDDALQLSGLVITKLDGTAKGGVLAAIAR
VRPVPVYFIGIGEKIEDLQPFVAAEFVEALLG

Nucleotide

• Length: 1059 bp

>NTDB_id=592384 KY494_RS13445 WP_219891263.1 2993311..2994369(+) (pilA) [Janthinobacterium sp. PAMC25594]
ATGTTTAGTTTCTTCAAGAAAAAACCCATCGCTCCCGAGGCTGCGCCAGCCGAGCCCCTCGTCCTTCCCGCCGCCACGCC
GCCCGCACCGCAGCCTGCCGCTACGCCCCTGAGCGGCGCGCCGGCCGAGCTCGTGCCCGTGATCGTGGCCGCCGAACCCG
AGAAAAAATCGTGGATGACGCGCCTGAAGGCGGGCCTGTCGAAAACCTCGAATACCTTGTCCGTGCTGTTCGTCGGCGCG
AAGATCGACGACGCCCTGTACGAAGAGCTGGAGGCGGCGCTGCTGATGTCCGACGCGGGCATCGACGCCACGGAATTCCT
GCTCACGGAATTGAAGAAAAAGGTCAAGGAAGACAAGCTGCTCGACGCCGCCGCCGTCAAGGCCGCGCTGAAGGTACTGC
TGATCGACCTGCTCTCGCCGCTGGAAAAGCGCTTCGAGCTGGGCCGCTACAAGCCGCTGGTGATGATGATTTCCGGCGTG
AATGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGCACATGCAGTCGAACAACCAGTCCGTGCTGCTGGCCGC
GGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAACTGATGGTCTGGGGCGAGCGCAACAACGTCAGCGTGATTTCGCAGG
AATCGGGCGACCCGGCCGCCGTGGCCTACGACTCCGTGCAATCGGCGAAGGCGCGCGGCATCGACGTGGTCATGGTCGAC
ACGGCCGGCCGCTTGCCGACGCAGTTGCACCTGATGGAAGAGTTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGA
GGGCGCGCCGCATGAAACCCTGCTCGTCATCGACGGCAACACGGGCCAGAATGCCCTCACGCAAGTGAAAGCGTTTGACG
ATGCCTTGCAGTTGAGCGGCCTGGTGATCACCAAGCTCGATGGTACCGCCAAGGGCGGCGTGCTGGCGGCGATTGCCCGC
GTACGCCCCGTGCCCGTGTATTTCATCGGCATCGGTGAAAAAATTGAAGACTTGCAGCCTTTCGTGGCTGCCGAATTTGT
CGAAGCGCTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-131)

• SRP54-type protein, GTPase domain (SRP54) (153-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	56.402	93.182	0.526