Detailed information NTG0059217

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J54_RS02630
• Genome accession: NZ_AP018766
• Coordinates: 532555..533553 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-3 isolate 13H41
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 527555..538553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J54_RS02605 (CHBNII3_04860)	tehA	528533..529477 (+)	945	WP_042593301.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J54_RS02610 (CHBNII3_04870)	tsaA	529526..530245 (-)	720	WP_042593302.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J54_RS02615 (CHBNII3_04880)	menA	530307..531218 (+)	912	WP_042593303.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J54_RS02620 (CHBNII3_04890)	rraA	531270..531758 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J54_RS02625 (CHBNII3_04900)	-	531898..532449 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J54_RS02630 (CHBNII3_04910)	cytR	532555..533553 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
K6J54_RS02635 (CHBNII3_04920)	rbsK	533581..534501 (-)	921	WP_042593304.1	ribokinase	-
K6J54_RS02640 (CHBNII3_04930)	rbsB	534599..535477 (-)	879	WP_042593305.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J54_RS02645 (CHBNII3_04940)	rbsC	535497..536465 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J54_RS02650 (CHBNII3_04950)	rbsA	536481..537962 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J54_RS02655	rbsD	537976..538394 (-)	419	Protein_503	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=59217 K6J54_RS02630 WP_005659739.1 532555..533553(-) (cytR) [Haemophilus influenzae strain CHBN-II-3 isolate 13H41]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59217 K6J54_RS02630 WP_005659739.1 532555..533553(-) (cytR) [Haemophilus influenzae strain CHBN-II-3 isolate 13H41]
ATGGCGACAATGAAAGATATTGCTCGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361