Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   KZ795_RS00360 Genome accession   NZ_CP080286
Coordinates   75230..75787 (+) Length   185 a.a.
NCBI ID   WP_003125211.1    Uniprot ID   A0A6A9K9C7
Organism   Pseudomonas aeruginosa strain UNC_PaerCF12     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 70230..80787
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZ795_RS00340 (KZ795_00340) pilR 71506..72843 (+) 1338 WP_003094694.1 two-component system response regulator PilR Regulator
  KZ795_RS00345 (KZ795_00345) thiO 72889..73983 (-) 1095 WP_039028141.1 glycine oxidase ThiO -
  KZ795_RS00350 (KZ795_00350) - 74118..74627 (+) 510 WP_073649713.1 Tfp pilus assembly protein FimT/FimU -
  KZ795_RS00355 (KZ795_00355) - 74733..75239 (+) 507 WP_003134935.1 Tfp pilus assembly protein FimT/FimU -
  KZ795_RS00360 (KZ795_00360) pilV 75230..75787 (+) 558 WP_003125211.1 type 4a pilus minor pilin PilV Machinery gene
  KZ795_RS00365 (KZ795_00365) pilW 75784..76608 (+) 825 WP_073649714.1 type 4a pilus minor pilin PilW -
  KZ795_RS00370 (KZ795_00370) pilX 76605..77192 (+) 588 WP_033972921.1 type 4a pilus minor pilin PilX -
  KZ795_RS00375 (KZ795_00375) pilY1 77204..80689 (+) 3486 WP_058179499.1 type 4a pilus biogenesis protein PilY1 -

Sequence

Protein


Download         Length: 185 a.a.        Molecular weight: 20087.19 Da        Isoelectric Point: 8.2171

>NTDB_id=591925 KZ795_RS00360 WP_003125211.1 75230..75787(+) (pilV) [Pseudomonas aeruginosa strain UNC_PaerCF12]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP

Nucleotide


Download         Length: 558 bp        

>NTDB_id=591925 KZ795_RS00360 WP_003125211.1 75230..75787(+) (pilV) [Pseudomonas aeruginosa strain UNC_PaerCF12]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-34)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A9K9C7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Pseudomonas aeruginosa PAK

98.919

100

0.989