Detailed information NTG0059155

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J63_RS03045
• Genome accession: NZ_AP018765
• Coordinates: 591392..592390 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-2 isolate 12H49
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 586392..597390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J63_RS03020 (CHBNII2_05760)	tehA	587360..588304 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J63_RS03025 (CHBNII2_05770)	tsaA	588357..589076 (-)	720	WP_105886701.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J63_RS03030 (CHBNII2_05780)	menA	589138..590055 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J63_RS03035 (CHBNII2_05790)	rraA	590107..590595 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J63_RS03040 (CHBNII2_05800)	-	590735..591286 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J63_RS03045 (CHBNII2_05810)	cytR	591392..592390 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
K6J63_RS03050 (CHBNII2_05820)	rbsK	592418..593338 (-)	921	WP_105892778.1	ribokinase	-
K6J63_RS03055 (CHBNII2_05830)	rbsB	593436..594314 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J63_RS03060 (CHBNII2_05840)	rbsC	594334..595302 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J63_RS03065 (CHBNII2_05850)	rbsA	595318..596799 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J63_RS03070 (CHBNII2_05860)	rbsD	596813..597232 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=59155 K6J63_RS03045 WP_005659739.1 591392..592390(-) (cytR) [Haemophilus influenzae strain CHBN-II-2 isolate 12H49]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59155 K6J63_RS03045 WP_005659739.1 591392..592390(-) (cytR) [Haemophilus influenzae strain CHBN-II-2 isolate 12H49]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361