Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   MUK60_RS12525 Genome accession   NZ_CP096907
Coordinates   2821142..2821924 (+) Length   260 a.a.
NCBI ID   WP_189774560.1    Uniprot ID   A0ABZ1JCH7
Organism   Streptomyces sp. LRE541     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2816142..2826924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUK60_RS12515 (MUK60_12515) - 2817006..2819909 (-) 2904 WP_248777093.1 vitamin B12-dependent ribonucleotide reductase -
  MUK60_RS12520 (MUK60_12520) nrdR 2820063..2820614 (-) 552 WP_248777094.1 transcriptional regulator NrdR -
  MUK60_RS12525 (MUK60_12525) dinR/lexA 2821142..2821924 (+) 783 WP_189774560.1 transcriptional repressor LexA Regulator
  MUK60_RS12530 (MUK60_12530) - 2822085..2824070 (-) 1986 WP_248777095.1 ATP-dependent DNA helicase -
  MUK60_RS12535 (MUK60_12535) - 2824171..2825994 (-) 1824 WP_349294275.1 IucA/IucC family siderophore biosynthesis protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 28163.87 Da        Isoelectric Point: 7.3613

>NTDB_id=591179 MUK60_RS12525 WP_189774560.1 2821142..2821924(+) (dinR/lexA) [Streptomyces sp. LRE541]
MTTTADSATITAQDRSQGRFEPVQAMNETANQEGPKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMR
EIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSTAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVE
DVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYQ
PIPGDEATILGKVVAVLRRI

Nucleotide


Download         Length: 783 bp        

>NTDB_id=591179 MUK60_RS12525 WP_189774560.1 2821142..2821924(+) (dinR/lexA) [Streptomyces sp. LRE541]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGATTTGAGCCGGTGCAAGCCATGAA
TGAAACCGCGAACCAGGAGGGGCCCAAGCCCGCCCGCTCCCTGCCGGGCCGACCTCCAGGCATCCGGGCGGACAGCTCCG
GACTCACCGACCGGCAGCGCCGCGTCATCGAGGTCATCAGGGACTCCGTCCAGCGGCGGGGATACCCACCGTCCATGAGG
GAGATCGGGCAGGCCGTGGGCCTCTCCAGCACCTCCTCCGTGGCTCATCAGCTGATGGCACTGGAGCGCAAGGGCTTCTT
GCGCCGCGATCCGCACCGCCCCAGGGCCTACGAGGTCCGCGGATCCGACCAGTCCACCGCGCAGCCCACCGACACGGCCG
GCAAGCCGGCGGCGTCGTACGTCCCGCTCGTCGGCCGGATCGCCGCCGGTGGTCCGATCCTCGCCGAGGAGTCGGTCGAG
GACGTCTTCCCGCTGCCCCGGCAGCTGGTCGGCGACGGTGAGCTGTTCGTACTGAAGGTCGTCGGCGACTCGATGATCGA
AGCCGCGATCTGCGACGGCGACTGGGTGACCGTCCGGCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCGGCCATGC
TGGACGGTGAGGCGACGGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACTCCGCCTACCAG
CCCATCCCCGGTGACGAGGCGACCATCCTCGGGAAGGTCGTGGCGGTGCTCCGGCGGATCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(53-116)

Peptidase S24-like (Peptidase_S24)

(142-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.238

80.769

0.365