Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KZX49_RS17375 Genome accession   NZ_CP080099
Coordinates   3491455..3492051 (-) Length   198 a.a.
NCBI ID   WP_219803914.1    Uniprot ID   -
Organism   Klebsiella quasipneumoniae strain WW-14A     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3486455..3497051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZX49_RS17360 (KZX49_17350) helD 3486666..3488720 (-) 2055 WP_085550655.1 DNA helicase IV -
  KZX49_RS17365 (KZX49_17355) - 3488845..3489291 (+) 447 WP_004201437.1 YccF domain-containing protein -
  KZX49_RS17370 (KZX49_17360) yccS 3489309..3491444 (+) 2136 WP_023289054.1 YccS family putative transporter -
  KZX49_RS17375 (KZX49_17365) sxy/tfoX 3491455..3492051 (-) 597 WP_219803914.1 TfoX/Sxy family DNA transformation protein Regulator
  KZX49_RS17380 (KZX49_17370) - 3492069..3492374 (-) 306 WP_158238131.1 hypothetical protein -
  KZX49_RS17385 (KZX49_17375) sulA 3492400..3492909 (+) 510 WP_085550654.1 SOS-induced cell division inhibitor SulA -
  KZX49_RS17390 (KZX49_17380) ompA 3493262..3494332 (+) 1071 WP_032455308.1 porin OmpA -
  KZX49_RS17395 (KZX49_17385) matP 3494479..3494931 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KZX49_RS17400 (KZX49_17390) - 3495117..3496874 (+) 1758 WP_219803915.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22627.32 Da        Isoelectric Point: 10.0730

>NTDB_id=591110 KZX49_RS17375 WP_219803914.1 3491455..3492051(-) (sxy/tfoX) [Klebsiella quasipneumoniae strain WW-14A]
MRKLVCPRLPQFQACVSPLGQLHSRPLFGGYSLAIEDTVFAMVAEGNIYLKACEQSAAYRVEHHNPLLMLLRHGRIVPLK
YYQIDDALWRDEKQLFRLSLMSWQSAQREKYRRRSSGRLKDLPNISFHMELQLIHSGIPDVLALREVGARQAWLKLRENN
ASLSHNVLLALEGAIVGVHAAALPTPRRQELLEWASAR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=591110 KZX49_RS17375 WP_219803914.1 3491455..3492051(-) (sxy/tfoX) [Klebsiella quasipneumoniae strain WW-14A]
ATGAGAAAACTCGTATGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCTCCGCTGGGCCAACTTCACTCTCGCCCCCT
GTTTGGCGGCTACAGCCTGGCTATCGAAGATACCGTGTTTGCGATGGTGGCAGAGGGGAATATTTATCTAAAGGCCTGCG
AGCAGAGCGCTGCCTATCGGGTAGAACACCATAATCCTTTATTGATGCTGCTCCGACACGGGCGCATCGTGCCGCTAAAG
TATTATCAAATCGACGATGCCTTGTGGCGCGATGAGAAACAGCTTTTCCGCTTGTCGCTGATGTCGTGGCAGAGCGCCCA
GCGTGAAAAATATCGCCGCCGGTCGTCGGGACGCCTGAAGGATTTACCCAATATCAGTTTTCATATGGAGTTGCAGCTGA
TTCACTCGGGCATTCCAGACGTGTTAGCACTACGGGAGGTGGGCGCCCGCCAGGCCTGGCTAAAGCTGCGCGAGAACAAT
GCTTCACTATCGCACAACGTCTTGCTGGCGCTGGAGGGGGCTATCGTTGGCGTTCATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTGGAATGGGCGTCTGCGCGCTAA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

49.746

99.495

0.495