Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxP   Type   Regulator
Locus tag   KZR01_RS03770 Genome accession   NZ_CP080097
Coordinates   892390..893487 (-) Length   365 a.a.
NCBI ID   WP_005453580.1    Uniprot ID   A0A9X3RVB5
Organism   Vibrio harveyi strain     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context

Location: 887390..898487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZR01_RS03750 - 887456..887911 (-) 456 WP_053049148.1 Lrp/AsnC family transcriptional regulator -
  KZR01_RS03755 - 888061..888987 (+) 927 WP_061066281.1 DMT family transporter -
  KZR01_RS03760 - 889081..889743 (+) 663 WP_009696231.1 PilZ domain-containing protein -
  KZR01_RS03765 luxQ 889811..892390 (-) 2580 WP_045489881.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  KZR01_RS03770 luxP 892390..893487 (-) 1098 WP_005453580.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  KZR01_RS03775 - 893837..894163 (-) 327 WP_017188723.1 GIY-YIG nuclease family protein -
  KZR01_RS03780 - 894160..894813 (-) 654 WP_005453575.1 YceH family protein -
  KZR01_RS03785 - 894907..895110 (-) 204 WP_009696233.1 hypothetical protein -
  KZR01_RS03790 - 895349..895663 (+) 315 WP_005453573.1 DUF496 family protein -
  KZR01_RS03795 - 895787..897124 (+) 1338 WP_029790049.1 MATE family efflux transporter -
  KZR01_RS03800 - 897266..898255 (-) 990 WP_045489885.1 Gfo/Idh/MocA family protein -

Sequence

Protein


Download         Length: 365 a.a.        Molecular weight: 41582.03 Da        Isoelectric Point: 6.7059

>NTDB_id=591053 KZR01_RS03770 WP_005453580.1 892390..893487(-) (luxP) [Vibrio harveyi strain]
MKKALLFSLISMVGFSPVSHATQVLNGYWGYQEFLDEFPQQRKLTNALAEAVRERPVPFSKNKKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQINQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKYFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLEKHPDVDFIYACSTDVALGAVEALADLGRSDVMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEIVTKADSPERIETLKKRAFRYSDN

Nucleotide


Download         Length: 1098 bp        

>NTDB_id=591053 KZR01_RS03770 WP_005453580.1 892390..893487(-) (luxP) [Vibrio harveyi strain]
ATGAAAAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTCTCTCCTGTTTCACATGCAACGCAAGTGCTCAATGG
CTACTGGGGTTATCAAGAGTTCTTGGATGAATTCCCGCAGCAGCGAAAACTCACTAATGCTTTAGCAGAAGCCGTTCGTG
AACGTCCTGTACCATTCTCTAAAAACAAAAAGCGTCCGCTTAAAATATCCGTGGTTTATCCGGGGCAGCAAGTATCTGAT
TACTGGGTAAGAAACATTGCGGCATTTGAAAAGCGCTTGGACAAGCTAAATATCAACTATCAGATCAACCAAGTTTTCAC
ACGCCCTAATGCGGATATTAAGCAGCAAAGCTTGTCGTTAATGGAAGCGCTGAAGAGCAAATCCGATTATTTGATTTTTA
CGTTAGATACAACCAGACACCGCAAATTTGTTGAACACGTTCTTGATTCAACAAACACCAAATTGATCTTACAAAATATC
ACGACTCCAGTGCGTGAATGGGATAAACATCAACCGTTTTTATATGTCGGATTTGATCACGCGGAAGGTAGCCGTGAATT
AGCGACAGAATTCGGAAAGTACTTTCCGAAGCACACCTATTACAGTGTGCTCTATTTCTCGGAAGGGTACATTAGTGATG
TGAGAGGTGACACGTTTATTCATCAGGTTAACCGTGATAATAACTTTGAACTACAATCAGCGTACTACACTAAAGCAACA
AAGCAGTCGGGATATGATGCTGCAAAAGCAAGTTTAGAAAAGCACCCAGATGTTGATTTTATTTATGCGTGCTCGACTGA
TGTTGCGTTAGGCGCTGTTGAGGCGTTAGCAGATTTAGGGCGAAGTGACGTTATGATCAACGGTTGGGGCGGTGGTTCAG
CAGAACTTGACGCTATTCAGAAAGGCGACTTAGATATCACTGTCATGCGTATGAATGATGATACTGGTATTGCCATGGCA
GAAGCCATTAAGTGGGATTTGGAAGGAAAACCTGTCCCAACCGTATATTCCGGTGATTTTGAAATTGTTACCAAAGCTGA
TTCACCGGAAAGAATCGAAACGCTGAAGAAGCGTGCATTTAGATATTCAGATAATTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein domain (Peripla_BP_4)

(69-324)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

63.187

99.726

0.63