Detailed information NTG0059093

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J65_RS03045
• Genome accession: NZ_AP018764
• Coordinates: 591394..592392 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-1 isolate 13H34
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 586394..597392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J65_RS03020 (CHBNII1_05760)	tehA	587362..588306 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J65_RS03025 (CHBNII1_05770)	tsaA	588359..589078 (-)	720	WP_105886701.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J65_RS03030 (CHBNII1_05780)	menA	589140..590057 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J65_RS03035 (CHBNII1_05790)	rraA	590109..590597 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J65_RS03040 (CHBNII1_05800)	-	590737..591288 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J65_RS03045 (CHBNII1_05810)	cytR	591394..592392 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
K6J65_RS03050 (CHBNII1_05820)	rbsK	592420..593340 (-)	921	WP_105892778.1	ribokinase	-
K6J65_RS03055 (CHBNII1_05830)	rbsB	593438..594316 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J65_RS03060 (CHBNII1_05840)	rbsC	594336..595304 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J65_RS03065 (CHBNII1_05850)	rbsA	595320..596801 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J65_RS03070 (CHBNII1_05860)	rbsD	596815..597234 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=59093 K6J65_RS03045 WP_005659739.1 591394..592392(-) (cytR) [Haemophilus influenzae strain CHBN-II-1 isolate 13H34]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59093 K6J65_RS03045 WP_005659739.1 591394..592392(-) (cytR) [Haemophilus influenzae strain CHBN-II-1 isolate 13H34]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361