Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FGCSD_RS10285 Genome accession   NZ_AP018726
Coordinates   2080265..2080714 (+) Length   149 a.a.
NCBI ID   WP_129556326.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2075265..2085714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS10260 (FGCSD_2000) - 2076085..2076318 (-) 234 Protein_1958 hypothetical protein -
  FGCSD_RS10265 (FGCSD_2002) - 2076390..2077495 (+) 1106 WP_129555101.1 IS3 family transposase -
  FGCSD_RS10270 (FGCSD_2003) - 2077484..2077933 (-) 450 WP_231112740.1 hypothetical protein -
  FGCSD_RS10275 (FGCSD_2004) hasC 2078114..2079016 (-) 903 WP_129556325.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  FGCSD_RS10280 (FGCSD_2005) - 2079048..2080064 (-) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FGCSD_RS10285 (FGCSD_2006) rcrR 2080265..2080714 (+) 450 WP_129556326.1 MarR family transcriptional regulator Regulator
  FGCSD_RS10290 (FGCSD_2007) rcrP 2080707..2082416 (+) 1710 WP_129556327.1 ABC transporter ATP-binding protein Regulator
  FGCSD_RS10295 (FGCSD_2008) - 2082416..2084200 (+) 1785 WP_129556328.1 ABC transporter ATP-binding protein -
  FGCSD_RS10300 (FGCSD_2009) - 2084319..2085086 (+) 768 WP_015058074.1 epoxyqueuosine reductase QueH -
  FGCSD_RS10305 (FGCSD_2010) - 2085194..2085640 (+) 447 WP_129556329.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17429.37 Da        Isoelectric Point: 9.7810

>NTDB_id=59065 FGCSD_RS10285 WP_129556326.1 2080265..2080714(+) (rcrR) [Streptococcus dysgalactiae strain Kdys0611]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGEKDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=59065 FGCSD_RS10285 WP_129556326.1 2080265..2080714(+) (rcrR) [Streptococcus dysgalactiae strain Kdys0611]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACACGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAGG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTCACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAGCTGCCTTTGTTGCA
AGAATGTCGTAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAAGGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43

Multiple sequence alignment