Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MZK36_RS04930 Genome accession   NZ_CP096809
Coordinates   971443..971907 (+) Length   154 a.a.
NCBI ID   WP_001135764.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain SP007     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 966443..976907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZK36_RS10755 - 968357..968431 (+) 75 Protein_971 dihydroxyacetone kinase subunit L -
  MZK36_RS04910 (MZK36_04875) dhaM 968431..968811 (+) 381 WP_000443787.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  MZK36_RS04915 (MZK36_04880) - 969270..969983 (+) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  MZK36_RS04920 (MZK36_04885) - 969997..970644 (+) 648 WP_001809355.1 hypothetical protein -
  MZK36_RS04925 (MZK36_04890) - 970780..971433 (+) 654 WP_000401326.1 uracil-DNA glycosylase -
  MZK36_RS04930 (MZK36_04895) mutX 971443..971907 (+) 465 WP_001135764.1 8-oxo-dGTP diphosphatase Machinery gene
  MZK36_RS04935 (MZK36_04900) - 971920..973188 (+) 1269 WP_000924465.1 dihydroorotase -
  MZK36_RS04940 (MZK36_04905) - 973202..973462 (+) 261 WP_001105925.1 hypothetical protein -
  MZK36_RS04945 (MZK36_04910) pdrM 973473..974834 (+) 1362 WP_000278544.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  MZK36_RS04950 (MZK36_04915) - 974988..975956 (+) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17786.12 Da        Isoelectric Point: 4.2287

>NTDB_id=590415 MZK36_RS04930 WP_001135764.1 971443..971907(+) (mutX) [Streptococcus pneumoniae strain SP007]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTADLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=590415 MZK36_RS04930 WP_001135764.1 971443..971907(+) (mutX) [Streptococcus pneumoniae strain SP007]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACAGCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981