Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FGCSD_RS04395 Genome accession   NZ_AP018726
Coordinates   862715..863194 (+) Length   159 a.a.
NCBI ID   WP_129555578.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 857715..868194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS04370 (FGCSD_0804) rfbA 858574..859443 (+) 870 WP_129555575.1 glucose-1-phosphate thymidylyltransferase RfbA -
  FGCSD_RS04375 (FGCSD_0805) - 859443..860036 (+) 594 WP_129555576.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FGCSD_RS04380 (FGCSD_0806) rfbB 860280..861323 (+) 1044 WP_111716810.1 dTDP-glucose 4,6-dehydratase -
  FGCSD_RS11225 (FGCSD_0807) - 861512..862237 (+) 726 WP_231112755.1 type II CAAX endopeptidase family protein -
  FGCSD_RS04390 (FGCSD_0808) - 862328..862519 (-) 192 WP_129555577.1 hypothetical protein -
  FGCSD_RS04395 (FGCSD_0809) mutX 862715..863194 (+) 480 WP_129555578.1 8-oxo-dGTP diphosphatase Machinery gene
  FGCSD_RS04400 (FGCSD_0810) - 863244..864425 (+) 1182 WP_129555579.1 AI-2E family transporter -
  FGCSD_RS04405 (FGCSD_0811) - 864415..865662 (+) 1248 WP_129555580.1 CDC27 family protein -
  FGCSD_RS04410 (FGCSD_0812) - 865725..867377 (-) 1653 WP_129555581.1 NFACT family protein -
  FGCSD_RS04415 (FGCSD_0813) - 867555..867926 (+) 372 WP_111678100.1 hypothetical protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18504.70 Da        Isoelectric Point: 4.3397

>NTDB_id=59020 FGCSD_RS04395 WP_129555578.1 862715..863194(+) (mutX) [Streptococcus dysgalactiae strain Kdys0611]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGKLISDADSREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLTEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=59020 FGCSD_RS04395 WP_129555578.1 862715..863194(+) (mutX) [Streptococcus dysgalactiae strain Kdys0611]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTTCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTCACAGGATTTGAAGGGAAGCTTATTTCGGATGCTGACTCACGTGAAGGCACCCT
GGAATGGGTACCATACGATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTACTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.182

100

0.692

Multiple sequence alignment