Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   BALI_RS10075 Genome accession   NC_021362
Coordinates   2016542..2017018 (+) Length   158 a.a.
NCBI ID   WP_020451568.1    Uniprot ID   A0A6N2GNG1
Organism   Bacillus paralicheniformis ATCC 9945a     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2011542..2022018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BALI_RS10040 (BaLi_c20670) - 2012084..2012500 (+) 417 WP_020451562.1 hypothetical protein -
  BALI_RS10045 (BaLi_c20680) - 2012662..2013639 (+) 978 WP_020451563.1 alpha/beta hydrolase family protein -
  BALI_RS10050 (BaLi_c20690) - 2013700..2013924 (+) 225 WP_020451564.1 hypothetical protein -
  BALI_RS10060 (BaLi_c20720) - 2014621..2015217 (+) 597 WP_020451565.1 SAM-dependent methyltransferase -
  BALI_RS10065 (BaLi_c20730) - 2015323..2015805 (+) 483 WP_020451566.1 DUF4944 domain-containing protein -
  BALI_RS10070 (BaLi_c20740) - 2015839..2016411 (+) 573 WP_020451567.1 GNAT family N-acetyltransferase -
  BALI_RS10075 (BaLi_c20750) rok 2016542..2017018 (+) 477 WP_020451568.1 hypothetical protein Regulator
  BALI_RS22570 (BaLi_c20760) - 2017137..2017310 (+) 174 WP_020451569.1 hypothetical protein -
  BALI_RS10080 (BaLi_c20770) - 2017663..2018283 (-) 621 WP_020451570.1 hypothetical protein -
  BALI_RS10085 (BaLi_c20780) - 2018844..2019428 (+) 585 WP_020451571.1 TetR family transcriptional regulator -
  BALI_RS10090 (BaLi_c20790) - 2019509..2019841 (+) 333 WP_020451572.1 DMT family transporter -
  BALI_RS10095 (BaLi_c20800) - 2019844..2020161 (+) 318 WP_020451573.1 DMT family transporter -
  BALI_RS10100 (BaLi_c20810) speG 2020190..2020732 (+) 543 WP_020451574.1 spermidine N1-acetyltransferase -
  BALI_RS10105 (BaLi_c20820) - 2020769..2021095 (-) 327 WP_217626321.1 YxeA family protein -
  BALI_RS10110 (BaLi_c20830) - 2021305..2021745 (+) 441 WP_020451576.1 hypothetical protein -
  BALI_RS22965 - 2021806..2021931 (+) 126 WP_256379621.1 hypothetical protein -

Sequence


Protein


Download         Length: 158 a.a.        Molecular weight: 18322.18 Da        Isoelectric Point: 10.0056

>NTDB_id=59001 BALI_RS10075 WP_020451568.1 2016542..2017018(+) (rok) [Bacillus paralicheniformis ATCC 9945a]
MFDEREALRLRLEQLGDAEIQVMRELRKERQDIYSKLRELDRESDPAINKKSSLIDLASAAAEELKQSQIAADKHPPIKT
PSHTIFQSKTTIQREAALNILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=59001 BALI_RS10075 WP_020451568.1 2016542..2017018(+) (rok) [Bacillus paralicheniformis ATCC 9945a]
ATGTTCGACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
AAAAGAACGACAGGACATTTATTCGAAGCTGCGTGAATTGGACCGGGAGAGTGATCCCGCAATTAATAAAAAATCTTCAT
TGATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAAATTGCCGCTGACAAACATCCGCCCATCAAGACT
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGCGAGGCTGCCTTAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N2GNG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

43.407

100

0.5


Multiple sequence alignment