Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KY753_RS16250 Genome accession   NZ_CP079852
Coordinates   3267372..3267968 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP85     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3262372..3272968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KY753_RS16235 helD 3262580..3264634 (-) 2055 WP_087793735.1 DNA helicase IV -
  KY753_RS16240 - 3264759..3265205 (+) 447 WP_002898425.1 YccF domain-containing protein -
  KY753_RS16245 yccS 3265223..3267358 (+) 2136 WP_002898422.1 YccS family putative transporter -
  KY753_RS16250 sxy/tfoX 3267372..3267968 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  KY753_RS16255 sulA 3268317..3268826 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KY753_RS16260 ompA 3269179..3270249 (+) 1071 WP_002898408.1 porin OmpA -
  KY753_RS16265 matP 3270381..3270833 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KY753_RS16270 - 3271019..3272776 (+) 1758 WP_016529118.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=589893 KY753_RS16250 WP_004179217.1 3267372..3267968(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP85]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=589893 KY753_RS16250 WP_004179217.1 3267372..3267968(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP85]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAAAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51