Detailed information NTG0589752

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LPB404_RS03405
• Genome accession: NZ_CP079821
• Coordinates: 667620..668726 (+)
• Length: 368 a.a.
• NCBI ID: WP_257573065.1
• Uniprot ID: -
• Organism: Streptococcus rubneri strain LPB0404
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 662620..673726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPB404_RS03375 (LPB404_03375)	-	663683..663988 (-)	306	WP_219075032.1	DUF5960 family protein	-
LPB404_RS03380 (LPB404_03380)	-	663969..664340 (-)	372	WP_219075033.1	hypothetical protein	-
LPB404_RS03385 (LPB404_03385)	-	664337..665749 (-)	1413	WP_219075034.1	Y-family DNA polymerase	-
LPB404_RS03390 (LPB404_03390)	-	665752..666429 (-)	678	WP_135781846.1	XRE family transcriptional regulator	-
LPB404_RS03395 (LPB404_03395)	rsmD	666612..667151 (+)	540	WP_219075035.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LPB404_RS03400 (LPB404_03400)	coaD	667141..667614 (+)	474	WP_219075036.1	pantetheine-phosphate adenylyltransferase	-
LPB404_RS03405 (LPB404_03405)	sepM	667620..668726 (+)	1107	WP_257573065.1	SepM family pheromone-processing serine protease	Regulator
LPB404_RS03410 (LPB404_03410)	ccdA2	669040..669750 (+)	711	WP_219075037.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
LPB404_RS03415 (LPB404_03415)	-	669777..670082 (+)	306	WP_023026435.1	hypothetical protein	-
LPB404_RS03420 (LPB404_03420)	-	670148..670708 (+)	561	WP_219075038.1	redoxin family protein	-
LPB404_RS03425 (LPB404_03425)	msrB	670721..671842 (+)	1122	WP_219075039.1	peptide-methionine (R)-S-oxide reductase MsrB	-
LPB404_RS03430 (LPB404_03430)	-	671901..672635 (+)	735	WP_219075040.1	response regulator	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40706.18 Da
• Isoelectric Point: 5.1879

>NTDB_id=589752 LPB404_RS03405 WP_257573065.1 667620..668726(+) (sepM) [Streptococcus rubneri strain LPB0404]
MNEFEKQRAQLPESPFEPVRKKDSVWRTYRWPIIGTLLLILALLAFFVPLPYYLEMPGSSEDIRQVMRVNQKNDEASGSY
DFVTVAVKQATFSDIVYAWVTPFTDIHSEQEMTGGSSSEEFFRINQFYMETSQNTAKYQGLKTAGKETEMEFLGVYVMQV
AEDSTFKGVLNIADTVTAVNDKTFKSSKELIEYVGSQKIGDKVSVTYTEDGQTKTAEGKIIKLVNGKNGIGISLIDRTEV
KSDVPIEFATAGIGGPSAGMMFSLSIYTQVADPDLRQGRHIAGTGTINHDGTVGDIGGVDKKVVAADRAGAEIFFAPDNP
VTEEVKKNNPHAKSNYDEAVETAKKIKTKMKIVPVKTLQDAIDYLKKN

Nucleotide

• Length: 1107 bp

>NTDB_id=589752 LPB404_RS03405 WP_257573065.1 667620..668726(+) (sepM) [Streptococcus rubneri strain LPB0404]
ATGAATGAATTTGAGAAACAAAGGGCTCAGCTACCAGAAAGCCCATTTGAACCTGTGCGCAAAAAAGATAGTGTATGGAG
AACCTATCGTTGGCCGATTATTGGGACCTTGCTTTTGATTTTGGCCTTGCTAGCTTTCTTTGTTCCCCTGCCCTACTATT
TGGAAATGCCAGGGAGTTCAGAAGATATTCGCCAAGTGATGCGCGTCAACCAGAAAAATGATGAAGCATCTGGTTCGTAT
GATTTTGTCACTGTTGCCGTCAAGCAAGCGACCTTCTCGGATATAGTCTATGCCTGGGTGACTCCTTTTACAGATATCCA
CTCTGAACAAGAAATGACTGGTGGCAGTTCCAGTGAGGAATTTTTCCGGATTAATCAATTTTATATGGAGACCTCTCAAA
ATACTGCCAAATACCAAGGATTAAAAACTGCTGGAAAAGAGACAGAGATGGAATTCTTAGGTGTTTATGTCATGCAAGTA
GCAGAAGACTCTACCTTTAAAGGCGTTCTAAATATTGCGGACACGGTTACGGCTGTGAATGACAAAACCTTCAAGAGCTC
AAAAGAGCTCATCGAGTATGTTGGTTCCCAAAAAATTGGGGACAAGGTCTCAGTGACCTACACAGAAGATGGTCAGACCA
AGACAGCTGAAGGAAAGATTATTAAGTTGGTCAATGGCAAGAATGGGATTGGGATTAGCTTGATTGACCGGACAGAAGTG
AAGAGTGACGTGCCGATTGAGTTTGCGACAGCTGGCATCGGTGGTCCAAGTGCCGGGATGATGTTTAGTTTGTCCATCTA
TACCCAAGTAGCGGATCCAGACCTTCGTCAGGGACGCCATATCGCGGGGACAGGGACCATTAACCATGATGGTACTGTCG
GAGACATCGGTGGAGTGGATAAAAAAGTCGTGGCGGCAGATCGCGCTGGTGCTGAAATCTTCTTTGCCCCTGATAATCCG
GTGACAGAGGAAGTTAAAAAGAACAATCCTCATGCCAAGAGCAACTACGATGAAGCGGTAGAAACAGCTAAAAAAATTAA
GACCAAGATGAAAATTGTCCCTGTCAAAACCTTGCAGGATGCTATTGATTATTTGAAAAAGAATTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (153-217)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (253-362)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	61.111	92.935	0.568