Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   EGT72_RS11645 Genome accession   NZ_CP079792
Coordinates   2346892..2351370 (-) Length   1492 a.a.
NCBI ID   WP_125280398.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain AJ_082     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2341892..2356370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT72_RS11615 (EGT72_011615) elsL 2342940..2343443 (-) 504 WP_125280402.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  EGT72_RS11620 (EGT72_011620) - 2343443..2343835 (-) 393 WP_125280401.1 YbaN family protein -
  EGT72_RS11625 (EGT72_011625) - 2343933..2344811 (+) 879 WP_125280400.1 DUF1853 family protein -
  EGT72_RS11630 (EGT72_011630) - 2344969..2345115 (+) 147 WP_004694480.1 entericidin A/B family lipoprotein -
  EGT72_RS11635 (EGT72_011635) dapE 2345233..2346366 (+) 1134 WP_125280399.1 succinyl-diaminopimelate desuccinylase -
  EGT72_RS11640 (EGT72_011640) - 2346432..2346887 (-) 456 WP_125273962.1 hypothetical protein -
  EGT72_RS11645 (EGT72_011645) chpA 2346892..2351370 (-) 4479 WP_125280398.1 Hpt domain-containing protein Regulator
  EGT72_RS11650 (EGT72_011650) - 2351535..2353607 (-) 2073 WP_125280397.1 methyl-accepting chemotaxis protein -
  EGT72_RS11655 (EGT72_011655) - 2353658..2354194 (-) 537 WP_086208515.1 chemotaxis protein CheW -
  EGT72_RS11660 (EGT72_011660) - 2354200..2354568 (-) 369 WP_125280396.1 response regulator -
  EGT72_RS11665 (EGT72_011665) pilG 2354596..2354979 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  EGT72_RS11670 (EGT72_011670) - 2355260..2355898 (+) 639 WP_125280395.1 hypothetical protein -

Sequence


Protein


Download         Length: 1492 a.a.        Molecular weight: 166757.42 Da        Isoelectric Point: 4.3912

>NTDB_id=589521 EGT72_RS11645 WP_125280398.1 2346892..2351370(-) (chpA) [Acinetobacter johnsonii strain AJ_082]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWVVEDTLNRVISGAVPLTATVQKFAKTVFKLFQFKLYPIFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELSDIEVVDSEPQVADASEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNVDETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVADELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTFELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIEPVAEAIVSRNT
LQPSLDLAQISQQIASDHQYKQSNTANTNFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTDKVDYPATATINVLHNIQSLVEGTTVT
TTVSEPLVEAFVAAVEEPLSNVDRTIEAEATAVESATAIEEPSIVDNTDVTVIEQLDTPSLVQEEAVSAVEEAASLLSIV
EETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYDP
LLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHLD
GGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADF
DPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTA
STLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDTEQRGAAKKSATGQIELNISRQGTDVIVSFKDDGKG
IDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGLGTTFII
RVPTTVAVSDALMVKAGDQQYAISLAQIDRIVRIAPTALDQYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGHS
LPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGNGHVCLILDGQNIARQILSTKRVTHAVDHR
DFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHEI
HQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4479 bp        

>NTDB_id=589521 EGT72_RS11645 WP_125280398.1 2346892..2351370(-) (chpA) [Acinetobacter johnsonii strain AJ_082]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTATGCTGAACCGACAC
ATCAAGAAACCTTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGTTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACGGCGTGGGTAGTTGAAGACACCTTAAACCGTGTGATTTCAGGGGCTGTACCGCTTACAGCAACGGTTCAAAA
ATTTGCTAAGACAGTATTCAAACTGTTTCAATTTAAACTGTATCCTATATTCAAAGCGGTACAGGAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACAGGATTAGAGCTGAGCGATATTGAAGTGGTTGACTCTGAGCCGCAAGT
TGCAGACGCATCTGAACAGGATGATCAAGTACATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGTAGATGAAACCAAAGTACAAGATTACAATGGTTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTTGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAGATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGATT
ATTTACATGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGCTGATGAGCTAAACCCACAAGGTATGGTCTCGAAGCTGATTGAGTTAAATATTGACCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTGGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGATTTTACTTTTGAGCTATATGCAGGTTAT
CAAGCCTTACTGGAAAAGCCTGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGCGTCATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACCGTAATTGAACCTGTTGCTGAGGCTATTGTTTCTAGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCAATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCTGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATACCGCGGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACCG
ATAAGGTTGATTATCCAGCAACAGCGACGATCAATGTACTGCATAACATTCAGAGCTTAGTTGAGGGTACGACTGTTACA
ACTACAGTATCCGAGCCTTTAGTTGAAGCGTTTGTTGCGGCAGTTGAAGAACCTTTATCTAATGTAGATAGAACGATTGA
AGCTGAGGCAACTGCGGTTGAGTCAGCAACTGCGATTGAAGAGCCGAGTATAGTTGATAACACTGACGTTACGGTCATTG
AACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGTCAGCGCTGTTGAAGAAGCAGCTAGTCTTTTATCAATTGTT
GAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACGTAG
TGACCGTAGTGTGTTACTACAATTGCAACGTGCTGCGCACAGCTTAAAAGGCGGCGCGCGTATGGCGGAGAATGAACCCG
TTGGTGCGATCGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGACCCA
TTATTGCAAACTGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTCAGTAATTATGATGGTCTGAAAAACAG
TTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCAACGCGTGTAACACAAATTGATTTACTCAATGCTGTAC
CAAGTTTTGAGTTTGTACAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGAT
GGCGGTAATGAGATGATCCGTATTTCAGCTGATTTGGTTGAGAAAATGATCGACCTATCTGGTGAAAATGCAATTAACCG
TTCACGTATCGAGATGGACTTAGGTCAACTCGGCAATACTTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGGATC
AGTTACGTCGAATGGAAGGCGAGCTTGAGAGTCAAATTATTGCGAAGCATGGTTCTGAAAACTCGCGCTACGCAGACTTT
GACCCCTTAGAAATGGACCAATATTCATCGCTAAATCAATTGTCTAAATCCTTAGCCGAATCAGCTTCGGATTTGGTCGA
CTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTACAACAATCTCGTATTCAAGCGGAGATTC
AAGAAAGCTTAATGCGGACACGTTTGGTACCGTTCTCACGTATGTTGCCACGTTTACAGCGTATTGTACGTCAGACCGCA
TCAACCTTGAACCGTCCCACGGAACTGGTCGTCCACAATACCGAAGGTGAATTGGACCGTACGATTCTTGAACGTTTGGT
TACACCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATACGGAACAACGTGGCGCTGCGAAAAAAT
CAGCGACAGGCCAAATTGAACTAAACATTAGTCGTCAAGGTACAGATGTTATCGTCAGCTTTAAAGATGATGGTAAGGGT
ATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAATTTAGGTTTAATTAAAGCCGATCAAGTACTAGATAAACAGGAAAT
TTTACAGTTTATTTTCCATCCAGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTAGGCCTTGATG
TGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGACTCGGCACAACCTTCATTATT
CGCGTACCGACTACGGTTGCGGTGAGTGATGCCTTGATGGTGAAAGCAGGCGATCAACAATATGCGATTTCATTGGCGCA
GATTGATCGTATTGTGCGTATTGCTCCAACAGCATTGGATCAGTATTTCCACAGCAAAGATGACCAATTCAAAATTGATG
GTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCGCGTTTGAGTAATATTGGACATTCA
TTGCCGGTATTATTGATTAAAGGCAATAGTGGACAAACCATTGCCTTATTGGTCGATCAGTTGATTGGTTCACGTGCGCA
AATTGTAGTGAAGCCGGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCTGGTGCAACGATTTTGGGTAATGGACATG
TGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTGACGCATGCAGTTGATCACCGT
GACTTTGGTCGCCATCAGGATACACGTCGTTTAGTGATGATTGTGGATGACTCGGTCACGGTACGTAAGGTGACATCGCG
CTTATTAGAGCGTCAAGGCTTTGATATTGTGACAGCAAAAGACGGTGTCGATGCGATGGAACAGCTTGAGAGCGTTAAAC
CAGACCTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTAACGAACTTGGTTCGTCACCACGAAATT
CACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGCGTGAC
ACACTACATGGGCAAACCATTCCAAGAGGCAGAATTACTTGCCAACATTCAGCAACTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.924

100

0.619