Detailed information NTG0058943

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LP6_RS13930
• Genome accession: NC_021350
• Coordinates: 3071910..3072977 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila str. Thunder Bay
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3066910..3077977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP6_RS13905 (LP6_2697)	-	3067201..3067917 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
LP6_RS13910 (LP6_2698)	-	3068199..3069065 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
LP6_RS13915 (LP6_2699)	rpoH	3069199..3070053 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
LP6_RS13920 (LP6_2700)	ftsX	3070350..3071279 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
LP6_RS13925 (LP6_2701)	ftsE	3071273..3071923 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
LP6_RS13930 (LP6_2702)	pilA	3071910..3072977 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
LP6_RS13935 (LP6_2703)	-	3073040..3074365 (+)	1326	WP_010948371.1	pitrilysin family protein	-
LP6_RS13940 (LP6_2704)	-	3074362..3075666 (+)	1305	WP_010948372.1	pitrilysin family protein	-
LP6_RS13945 (LP6_2705)	rsmD	3075663..3076208 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LP6_RS13950 (LP6_2706)	dotD	3076283..3076774 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
LP6_RS13955 (LP6_2707)	dotC	3076755..3077666 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=58943 LP6_RS13930 WP_015443981.1 3071910..3072977(-) (pilA) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=58943 LP6_RS13930 WP_015443981.1 3071910..3072977(-) (pilA) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501