Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KXZ66_RS22480 Genome accession   NZ_CP079759
Coordinates   379409..379549 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus sp. LJBS17     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 374409..384549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS22475 srfAB 376273..379365 (+) 3093 Protein_342 surfactin non-ribosomal peptide synthetase SrfAB -
  KXZ66_RS22480 comS 379409..379549 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=589360 KXZ66_RS22480 WP_010886404.1 379409..379549(+) (comS) [Bacillus sp. LJBS17]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=589360 KXZ66_RS22480 WP_010886404.1 379409..379549(+) (comS) [Bacillus sp. LJBS17]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1