Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   KXZ66_RS16390 Genome accession   NZ_CP079759
Coordinates   3162721..3163620 (-) Length   299 a.a.
NCBI ID   WP_015251332.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3157721..3168620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS16355 (KXZ66_16350) - 3157960..3158436 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  KXZ66_RS16360 (KXZ66_16355) - 3158436..3158720 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  KXZ66_RS16365 (KXZ66_16360) mnhG 3158704..3159078 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  KXZ66_RS16370 (KXZ66_16365) - 3159117..3159497 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  KXZ66_RS16375 (KXZ66_16370) comA 3159516..3160160 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KXZ66_RS16380 (KXZ66_16375) comP 3160241..3162551 (-) 2311 Protein_3187 two-component system sensor histidine kinase ComP -
  KXZ66_RS16385 (KXZ66_16380) comX 3162566..3162733 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  KXZ66_RS16390 (KXZ66_16385) comQ 3162721..3163620 (-) 900 WP_015251332.1 ComX modifying isoprenyl transferase ComQ Regulator
  KXZ66_RS16395 (KXZ66_16390) degQ 3163805..3163945 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KXZ66_RS22655 - 3164167..3164229 (+) 63 Protein_3191 hypothetical protein -
  KXZ66_RS16400 (KXZ66_16395) - 3164407..3164775 (+) 369 WP_038828672.1 hypothetical protein -
  KXZ66_RS16405 (KXZ66_16400) pdeH 3164751..3165980 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  KXZ66_RS16410 (KXZ66_16405) - 3166117..3167589 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  KXZ66_RS16415 (KXZ66_16410) - 3167605..3168156 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34188.12 Da        Isoelectric Point: 4.9041

>NTDB_id=589344 KXZ66_RS16390 WP_015251332.1 3162721..3163620(-) (comQ) [Bacillus sp. LJBS17]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGVYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=589344 KXZ66_RS16390 WP_015251332.1 3162721..3163620(-) (comQ) [Bacillus sp. LJBS17]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGTATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATTGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

99.666

100

0.997