Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LP6_RS10150 | Genome accession | NC_021350 |
| Coordinates | 2243864..2244178 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila subsp. pneumophila str. Thunder Bay | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2238864..2249178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP6_RS10125 (LP6_1973) | - | 2239293..2239793 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| LP6_RS10130 (LP6_1974) | - | 2240285..2241145 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| LP6_RS10135 (LP6_1975) | - | 2241262..2242455 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| LP6_RS10140 (LP6_1976) | lpp1976 | 2242565..2243122 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| LP6_RS10145 (LP6_1977) | lpp1977 | 2243119..2243925 (-) | 807 | WP_010947712.1 | hypothetical protein | Machinery gene |
| LP6_RS10150 | lpp1978 | 2243864..2244178 (-) | 315 | WP_010947713.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| LP6_RS10155 (LP6_1978) | hisC | 2244338..2245447 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| LP6_RS10160 (LP6_1979) | - | 2245484..2245825 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LP6_RS10165 (LP6_1980) | secF | 2245998..2246915 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| LP6_RS10170 (LP6_1981) | secD | 2246928..2248784 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| LP6_RS10175 (LP6_1982) | yajC | 2248806..2249141 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=58934 LP6_RS10150 WP_010947713.1 2243864..2244178(-) (lpp1978) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=58934 LP6_RS10150 WP_010947713.1 2243864..2244178(-) (lpp1978) [Legionella pneumophila subsp. pneumophila str. Thunder Bay]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |