Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KXZ66_RS12755 Genome accession   NZ_CP079759
Coordinates   2477264..2478067 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2472264..2483067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS12730 (KXZ66_12725) - 2473410..2474141 (-) 732 WP_049141221.1 glycerophosphodiester phosphodiesterase -
  KXZ66_RS12735 (KXZ66_12730) - 2474220..2474840 (-) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  KXZ66_RS12740 (KXZ66_12735) - 2474855..2475148 (-) 294 WP_003230284.1 lipoprotein -
  KXZ66_RS12745 (KXZ66_12740) - 2475456..2475608 (+) 153 WP_014480226.1 hypothetical protein -
  KXZ66_RS12750 (KXZ66_12745) - 2475681..2476799 (+) 1119 WP_049141220.1 NADH-dependent flavin oxidoreductase -
  KXZ66_RS12755 (KXZ66_12750) spo0A 2477264..2478067 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  KXZ66_RS12760 (KXZ66_12755) spoIVB 2478343..2479623 (-) 1281 WP_021480004.1 SpoIVB peptidase -
  KXZ66_RS12765 (KXZ66_12760) recN 2479798..2481528 (-) 1731 WP_017696435.1 DNA repair protein RecN Machinery gene
  KXZ66_RS12770 (KXZ66_12765) argR 2481563..2482012 (-) 450 WP_014114358.1 arginine repressor ArgR -
  KXZ66_RS12775 (KXZ66_12770) - 2482110..2482955 (-) 846 WP_219144586.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=589318 KXZ66_RS12755 WP_003226427.1 2477264..2478067(-) (spo0A) [Bacillus sp. LJBS17]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=589318 KXZ66_RS12755 WP_003226427.1 2477264..2478067(-) (spo0A) [Bacillus sp. LJBS17]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1