Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KXZ66_RS07565 Genome accession   NZ_CP079759
Coordinates   1458927..1459391 (-) Length   154 a.a.
NCBI ID   WP_086343783.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453927..1464391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS07545 (KXZ66_07545) kinA 1454394..1456214 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  KXZ66_RS07550 (KXZ66_07550) - 1456224..1457405 (-) 1182 WP_021479391.1 aminotransferase A -
  KXZ66_RS07555 (KXZ66_07555) - 1457607..1457768 (-) 162 WP_219144865.1 hypothetical protein -
  KXZ66_RS07560 (KXZ66_07560) cheV 1457972..1458883 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  KXZ66_RS07565 (KXZ66_07565) kre 1458927..1459391 (-) 465 WP_086343783.1 YkyB family protein Regulator
  KXZ66_RS07570 (KXZ66_07570) - 1459517..1460809 (-) 1293 WP_014479656.1 MFS transporter -
  KXZ66_RS07575 (KXZ66_07575) - 1460885..1461379 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  KXZ66_RS07580 (KXZ66_07580) - 1461436..1462293 (-) 858 WP_128737811.1 metallophosphoesterase -
  KXZ66_RS07585 (KXZ66_07585) fadH 1462436..1463200 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17865.68 Da        Isoelectric Point: 10.3545

>NTDB_id=589310 KXZ66_RS07565 WP_086343783.1 1458927..1459391(-) (kre) [Bacillus sp. LJBS17]
MDDHAYAKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=589310 KXZ66_RS07565 WP_086343783.1 1458927..1459391(-) (kre) [Bacillus sp. LJBS17]
ATGGACGACCATGCATATGCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTTTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994