Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   KXZ66_RS06205 Genome accession   NZ_CP079759
Coordinates   1211116..1212267 (+) Length   383 a.a.
NCBI ID   WP_219144852.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1206116..1217267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS06170 (KXZ66_06170) - 1206785..1208002 (+) 1218 WP_072175656.1 MFS transporter -
  KXZ66_RS06175 (KXZ66_06175) - 1208166..1208744 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  KXZ66_RS06180 (KXZ66_06180) spx 1208925..1209320 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  KXZ66_RS06185 (KXZ66_06185) - 1209366..1210022 (-) 657 WP_003232944.1 TerC family protein -
  KXZ66_RS06190 (KXZ66_06190) - 1210192..1210332 (+) 141 WP_119122854.1 hypothetical protein -
  KXZ66_RS06195 (KXZ66_06195) mecA 1210299..1210955 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  KXZ66_RS06200 (KXZ66_06200) - 1210950..1211072 (-) 123 WP_021479547.1 hypothetical protein -
  KXZ66_RS06205 (KXZ66_06205) coiA 1211116..1212267 (+) 1152 WP_219144852.1 competence protein CoiA Machinery gene
  KXZ66_RS06210 (KXZ66_06210) pepF 1212497..1214326 (+) 1830 WP_219144853.1 oligoendopeptidase F -
  KXZ66_RS06215 (KXZ66_06215) - 1214364..1214531 (-) 168 WP_003244944.1 hypothetical protein -
  KXZ66_RS06220 (KXZ66_06220) spxH 1214846..1215745 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  KXZ66_RS06225 (KXZ66_06225) - 1215742..1216140 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  KXZ66_RS06230 (KXZ66_06230) cwlQ 1216395..1217129 (-) 735 WP_257475331.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44945.07 Da        Isoelectric Point: 9.9164

>NTDB_id=589306 KXZ66_RS06205 WP_219144852.1 1211116..1212267(+) (coiA) [Bacillus sp. LJBS17]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCANIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSFQYSGWTKAIHRFRHKPH
RFNSKEINRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIYNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=589306 KXZ66_RS06205 WP_219144852.1 1211116..1212267(+) (coiA) [Bacillus sp. LJBS17]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTCCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCAATATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCCTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCATTTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAATAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCAAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTTATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.855

97.389

0.953