Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KXZ66_RS06085 Genome accession   NZ_CP079759
Coordinates   1188834..1189025 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. LJBS17     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1183834..1194025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS06055 (KXZ66_06055) argF 1184697..1185656 (+) 960 WP_038828321.1 ornithine carbamoyltransferase -
  KXZ66_RS06060 (KXZ66_06060) - 1185742..1185921 (+) 180 WP_003245356.1 YjzC family protein -
  KXZ66_RS06065 (KXZ66_06065) - 1185967..1186152 (-) 186 WP_003245236.1 YjzD family protein -
  KXZ66_RS06070 (KXZ66_06070) - 1186402..1187136 (+) 735 WP_049140719.1 hypothetical protein -
  KXZ66_RS06075 (KXZ66_06075) - 1187218..1187775 (+) 558 WP_014476424.1 hypothetical protein -
  KXZ66_RS06080 (KXZ66_06080) med 1187866..1188819 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  KXZ66_RS06085 (KXZ66_06085) comZ 1188834..1189025 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KXZ66_RS06090 (KXZ66_06090) yjzB 1189055..1189282 (-) 228 WP_120027973.1 spore coat protein YjzB -
  KXZ66_RS06095 (KXZ66_06095) fabH 1189447..1190385 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KXZ66_RS06100 (KXZ66_06100) fabF 1190408..1191649 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KXZ66_RS06105 (KXZ66_06105) - 1191725..1192510 (+) 786 WP_219144850.1 DUF2268 domain-containing protein -
  KXZ66_RS06110 (KXZ66_06110) appD 1192702..1193688 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=589302 KXZ66_RS06085 WP_003224559.1 1188834..1189025(+) (comZ) [Bacillus sp. LJBS17]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=589302 KXZ66_RS06085 WP_003224559.1 1188834..1189025(+) (comZ) [Bacillus sp. LJBS17]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1