Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KXZ66_RS04540 Genome accession   NZ_CP079759
Coordinates   905752..906546 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. LJBS17     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900752..911546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXZ66_RS04510 (KXZ66_04510) - 901591..902622 (+) 1032 WP_049140593.1 iron chelate uptake ABC transporter family permease subunit -
  KXZ66_RS04515 (KXZ66_04515) - 902737..903618 (+) 882 WP_038829483.1 PhzF family phenazine biosynthesis isomerase -
  KXZ66_RS04520 (KXZ66_04520) - 903706..904290 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  KXZ66_RS04525 (KXZ66_04525) - 904329..904520 (-) 192 WP_003233561.1 YfhD family protein -
  KXZ66_RS04530 (KXZ66_04530) - 904587..904697 (-) 111 WP_003223230.1 YfhE family protein -
  KXZ66_RS04535 (KXZ66_04535) - 904752..905663 (-) 912 WP_032726611.1 TIGR01777 family oxidoreductase -
  KXZ66_RS04540 (KXZ66_04540) recX 905752..906546 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  KXZ66_RS04545 (KXZ66_04545) - 906548..906862 (+) 315 WP_049140592.1 YfhH family protein -
  KXZ66_RS04550 (KXZ66_04550) - 907005..908198 (+) 1194 WP_219144831.1 MFS transporter -
  KXZ66_RS04555 (KXZ66_04555) - 908230..908382 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  KXZ66_RS04560 (KXZ66_04560) - 908507..908776 (+) 270 WP_003243789.1 YfhJ family protein -
  KXZ66_RS04565 (KXZ66_04565) - 908921..909439 (+) 519 WP_049140591.1 SH3 domain-containing protein -
  KXZ66_RS04570 (KXZ66_04570) spdL 909524..909856 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  KXZ66_RS04575 (KXZ66_04575) ephM 909843..910703 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=589293 KXZ66_RS04540 WP_029726844.1 905752..906546(+) (recX) [Bacillus sp. LJBS17]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=589293 KXZ66_RS04540 WP_029726844.1 905752..906546(+) (recX) [Bacillus sp. LJBS17]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996