Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | KX728_RS06400 | Genome accession | NZ_CP079724 |
| Coordinates | 1293825..1296083 (+) | Length | 752 a.a. |
| NCBI ID | WP_215804498.1 | Uniprot ID | - |
| Organism | Streptococcus oralis strain 34 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1288825..1301083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KX728_RS06365 (KX728_06360) | - | 1289123..1289584 (+) | 462 | Protein_1215 | replication initiation protein | - |
| KX728_RS06370 (KX728_06365) | - | 1289610..1290383 (-) | 774 | WP_215804502.1 | HAD hydrolase family protein | - |
| KX728_RS06375 (KX728_06370) | - | 1290388..1291245 (-) | 858 | WP_215804501.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| KX728_RS06380 (KX728_06375) | - | 1291394..1291714 (-) | 321 | WP_215804500.1 | TfoX/Sxy family protein | - |
| KX728_RS06385 (KX728_06380) | - | 1291748..1292482 (-) | 735 | WP_215804499.1 | amino acid ABC transporter ATP-binding protein | - |
| KX728_RS06390 (KX728_06385) | - | 1292482..1293165 (-) | 684 | WP_001011622.1 | amino acid ABC transporter permease | - |
| KX728_RS06395 (KX728_06390) | - | 1293357..1293587 (+) | 231 | WP_000443577.1 | DUF1797 family protein | - |
| KX728_RS06400 (KX728_06395) | clpE | 1293825..1296083 (+) | 2259 | WP_215804498.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| KX728_RS06405 (KX728_06400) | - | 1296214..1296666 (+) | 453 | WP_215804497.1 | NUDIX hydrolase | - |
| KX728_RS06410 (KX728_06405) | - | 1296725..1297024 (+) | 300 | WP_000767202.1 | DUF1827 family protein | - |
| KX728_RS06415 (KX728_06410) | metK | 1297095..1298285 (-) | 1191 | WP_000003916.1 | methionine adenosyltransferase | - |
| KX728_RS06420 (KX728_06415) | - | 1298587..1299966 (-) | 1380 | WP_215804496.1 | VWA domain-containing protein | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83909.33 Da Isoelectric Point: 5.0779
>NTDB_id=588985 KX728_RS06400 WP_215804498.1 1293825..1296083(+) (clpE) [Streptococcus oralis strain 34]
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQERGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKIRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKPLSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPSEK
DLKAVMTSNGKIQIKSAKKTEKTEEIASEIEE
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQERGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKIRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKPLSKDNLLQIVELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPSEK
DLKAVMTSNGKIQIKSAKKTEKTEEIASEIEE
Nucleotide
Download Length: 2259 bp
>NTDB_id=588985 KX728_RS06400 WP_215804498.1 1293825..1296083(+) (clpE) [Streptococcus oralis strain 34]
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGACAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCTTTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCTAATAACGTCCCTCCAACTCAA
TCTGGTGGAGGATATGGAGGAAACGGTGGTTATGGGCCTCAAAACCGCGGCCCACTTCAAACACCTCCTAGCCAAGAAAG
AGGACTCCTAGAGGAATACGGTATCAATATTACTGAGATTGCTCGTCGGGGAGATATTGACCCTGTTATCGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTTGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTTCAAGGCAAACAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTGCAACTAGTCGGAGCTACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCCCTAGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAAA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCTATCGAAGCT
GCTGCAAATCTTTCCAATCGCTATATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTAACGCTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGTTTAATTGAAGCTGAAAATCTCAAGGCTC
AAGCTACACGAGAGGAAGATTTTGAAAAGGCTGCTTATTTCCGCGATCAAATTGCCAAGTACAAGGAAATGCAAAAGAAC
AAGGTGACAGATCAGGATACTCCAATCATCAGCGAGAAAACAATCGAACATATCATTGAGCAGAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAGTCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGGCAAGATG
AAGCTGTCGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAGACAGAACTCTCTAAACAACTAGCCATTGAACTCTTTGGTTCTGCTGACAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTGGCTAAATTGGTCGGAGCCCCTCCAGGCTATGTAG
GCTACGATGAAGCTGGTCAATTAACGGAAAAAATTCGTCGCAATCCTTACTCACTCATCCTTCTCGATGAGGTCGAGAAA
GCCCATCCAGATGTCATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACAGATGGGCAAGGACGGACAGTTAG
CTTTAAGGATGCTATCATTATCATGACCTCAAATGCGGGTACCGGTAAGGCCGAAGCCAGCGTTGGTTTTGGAGCTGCTC
GTGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGTAACTTCTTTAGTCCAGAGTTTATGAACCGTTTTGACGGCATC
ATCGAATTTAAACCTCTCAGCAAGGACAACCTTCTCCAAATCGTCGAACTCATGCTAGCGGATGTCAACAAACGCCTCTC
TAGTAACAATATCCACCTCGATGTGACGGACAAAGTCAAGGAAAAGTTGGTTGACCTAGGATATGATCCAAAAATGGGAG
CGCGCCCTCTCCGTCGTACCATTCAAGACCATATCGAGGATGCCATCACTGACTTCTACCTTGAAAATCCAAGTGAAAAA
GACCTCAAGGCAGTCATGACAAGCAATGGCAAGATTCAAATTAAATCTGCCAAAAAAACTGAAAAAACAGAAGAGATTGC
TTCTGAAATAGAAGAATAA
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGACAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCTTTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCTAATAACGTCCCTCCAACTCAA
TCTGGTGGAGGATATGGAGGAAACGGTGGTTATGGGCCTCAAAACCGCGGCCCACTTCAAACACCTCCTAGCCAAGAAAG
AGGACTCCTAGAGGAATACGGTATCAATATTACTGAGATTGCTCGTCGGGGAGATATTGACCCTGTTATCGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTTGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTTCAAGGCAAACAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTGCAACTAGTCGGAGCTACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCCCTAGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAAA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCTATCGAAGCT
GCTGCAAATCTTTCCAATCGCTATATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTAACGCTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGTTTAATTGAAGCTGAAAATCTCAAGGCTC
AAGCTACACGAGAGGAAGATTTTGAAAAGGCTGCTTATTTCCGCGATCAAATTGCCAAGTACAAGGAAATGCAAAAGAAC
AAGGTGACAGATCAGGATACTCCAATCATCAGCGAGAAAACAATCGAACATATCATTGAGCAGAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAGTCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGGCAAGATG
AAGCTGTCGATAAGATTGCCAAAGCCATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAGACAGAACTCTCTAAACAACTAGCCATTGAACTCTTTGGTTCTGCTGACAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTGGCTAAATTGGTCGGAGCCCCTCCAGGCTATGTAG
GCTACGATGAAGCTGGTCAATTAACGGAAAAAATTCGTCGCAATCCTTACTCACTCATCCTTCTCGATGAGGTCGAGAAA
GCCCATCCAGATGTCATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACAGATGGGCAAGGACGGACAGTTAG
CTTTAAGGATGCTATCATTATCATGACCTCAAATGCGGGTACCGGTAAGGCCGAAGCCAGCGTTGGTTTTGGAGCTGCTC
GTGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGTAACTTCTTTAGTCCAGAGTTTATGAACCGTTTTGACGGCATC
ATCGAATTTAAACCTCTCAGCAAGGACAACCTTCTCCAAATCGTCGAACTCATGCTAGCGGATGTCAACAAACGCCTCTC
TAGTAACAATATCCACCTCGATGTGACGGACAAAGTCAAGGAAAAGTTGGTTGACCTAGGATATGATCCAAAAATGGGAG
CGCGCCCTCTCCGTCGTACCATTCAAGACCATATCGAGGATGCCATCACTGACTTCTACCTTGAAAATCCAAGTGAAAAA
GACCTCAAGGCAGTCATGACAAGCAATGGCAAGATTCAAATTAAATCTGCCAAAAAAACTGAAAAAACAGAAGAGATTGC
TTCTGAAATAGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
94.489 |
98.936 |
0.935 |
| clpE | Streptococcus pneumoniae D39 |
94.489 |
98.936 |
0.935 |
| clpE | Streptococcus pneumoniae R6 |
94.489 |
98.936 |
0.935 |
| clpE | Streptococcus pneumoniae TIGR4 |
94.355 |
98.936 |
0.934 |
| clpE | Streptococcus mutans UA159 |
83.289 |
100 |
0.835 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.894 |
100 |
0.762 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.462 |
86.436 |
0.453 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.393 |
86.702 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
46.593 |
83.91 |
0.391 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus pneumoniae Rx1 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus pneumoniae D39 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.349 |
83.777 |
0.388 |
| clpC | Streptococcus mutans UA159 |
46.349 |
83.777 |
0.388 |