Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KX728_RS01830 Genome accession   NZ_CP079724
Coordinates   360602..361333 (+) Length   243 a.a.
NCBI ID   WP_215804999.1    Uniprot ID   -
Organism   Streptococcus oralis strain 34     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 355602..366333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX728_RS01810 (KX728_01810) dnaJ 357899..359035 (+) 1137 WP_001066315.1 molecular chaperone DnaJ -
  KX728_RS01815 (KX728_01815) - 359113..359772 (-) 660 WP_215805001.1 hypothetical protein -
  KX728_RS01820 (KX728_01820) - 359836..360114 (-) 279 WP_000777740.1 hypothetical protein -
  KX728_RS01825 (KX728_01825) - 360124..360534 (-) 411 WP_215805000.1 HIT family protein -
  KX728_RS01830 (KX728_01830) pptA 360602..361333 (+) 732 WP_215804999.1 ABC transporter ATP-binding protein Regulator
  KX728_RS01835 (KX728_01835) - 361330..362379 (+) 1050 WP_215804998.1 ABC transporter permease -
  KX728_RS01840 (KX728_01840) ccrZ 362427..363221 (+) 795 WP_215804997.1 cell cycle regulator CcrZ -
  KX728_RS01845 (KX728_01845) trmB 363218..363853 (+) 636 WP_001266087.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KX728_RS01850 (KX728_01850) rimP 363980..364459 (+) 480 WP_215804996.1 ribosome maturation factor RimP -
  KX728_RS01855 (KX728_01855) nusA 364502..365638 (+) 1137 WP_049550482.1 transcription termination factor NusA -
  KX728_RS01860 (KX728_01860) rnpM 365660..365953 (+) 294 WP_000857560.1 RNase P modulator RnpM -
  KX728_RS01865 (KX728_01865) - 365946..366245 (+) 300 WP_001041399.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27257.73 Da        Isoelectric Point: 4.9050

>NTDB_id=588965 KX728_RS01830 WP_215804999.1 360602..361333(+) (pptA) [Streptococcus oralis strain 34]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREAATSYRKQIGYIP
ETPSLYEELTLREHFETVAMAYGIEQKVAFERVEHLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=588965 KX728_RS01830 WP_215804999.1 360602..361333(+) (pptA) [Streptococcus oralis strain 34]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCACGTCCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTAAACGGTGCTGGAAAATCAACGACTATCAATGAAATTATCGGTCTTTTGACTCCTT
ACAGTGGGGAAATTAAGATTAATGGTTTGACCCTGCGAGAAGCTGCGACTAGCTACCGCAAGCAGATTGGCTACATCCCA
GAGACGCCTAGCTTGTATGAGGAACTGACACTCAGAGAGCATTTCGAGACGGTTGCCATGGCTTATGGTATTGAGCAAAA
AGTGGCTTTTGAGCGAGTGGAACATTTGTTAAAGATGTTTCGTCTGGACCAAAAATTGGACTGGTTCCCAGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTGGTGGATCCGAGTCTTTTCATCGTTGATGAGCCTTTC
CTTGGGCTTGATCCGCTGGCTATTTCTGACTTGATTCAGCTTTTGGAAGTGGAAAAGCAAAAAGGCAAGTCTATTCTCAT
GAGTACCCATGTGCTAGACTCAGCAGAAAAGATGTGTGATGCCTTTGTTATTCTCCACAAGGGGGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTCCGTGAAGCCTTTGACATGCCTGAAGCTAGTTTGAATGACATTTATCTGGCTCTGACAAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712