Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KXY09_RS20095 Genome accession   NZ_CP079719
Coordinates   362091..362255 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus velezensis strain LABIM44     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 357091..367255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXY09_RS20090 srfAB 358982..362074 (+) 3093 Protein_335 surfactin non-ribosomal peptide synthetase SrfAB -
  KXY09_RS20095 comS 362091..362255 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=588943 KXY09_RS20095 WP_012116773.1 362091..362255(+) (comS) [Bacillus velezensis strain LABIM44]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=588943 KXY09_RS20095 WP_012116773.1 362091..362255(+) (comS) [Bacillus velezensis strain LABIM44]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5