Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   KXY09_RS04395 Genome accession   NZ_CP079719
Coordinates   878176..878967 (+) Length   263 a.a.
NCBI ID   WP_012117114.1    Uniprot ID   -
Organism   Bacillus velezensis strain LABIM44     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873176..883967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KXY09_RS04370 (KXY09_04370) - 875171..876055 (+) 885 WP_061581184.1 PhzF family phenazine biosynthesis isomerase -
  KXY09_RS04375 (KXY09_04375) - 876132..876716 (+) 585 WP_007408549.1 nitroreductase -
  KXY09_RS04380 (KXY09_04380) - 876755..876946 (-) 192 WP_003155508.1 YfhD family protein -
  KXY09_RS04385 (KXY09_04385) - 877017..877127 (-) 111 WP_136396218.1 YfhE family protein -
  KXY09_RS04390 (KXY09_04390) - 877185..878084 (-) 900 WP_136396219.1 TIGR01777 family oxidoreductase -
  KXY09_RS04395 (KXY09_04395) recX 878176..878967 (+) 792 WP_012117114.1 recombination regulator RecX Regulator
  KXY09_RS04400 (KXY09_04400) - 878974..879288 (+) 315 WP_007408553.1 YfhH family protein -
  KXY09_RS04405 (KXY09_04405) - 879432..880625 (+) 1194 WP_025284446.1 MFS transporter -
  KXY09_RS04410 (KXY09_04410) - 880665..881054 (-) 390 WP_043020687.1 DUF2606 family protein -
  KXY09_RS04415 (KXY09_04415) - 881017..881928 (-) 912 WP_015239429.1 serine protease -
  KXY09_RS04420 (KXY09_04420) - 882076..882228 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  KXY09_RS04425 (KXY09_04425) - 882352..882621 (+) 270 WP_003155492.1 YfhJ family protein -
  KXY09_RS04430 (KXY09_04430) - 882750..883277 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  KXY09_RS04435 (KXY09_04435) - 883363..883698 (+) 336 WP_043020688.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31004.21 Da        Isoelectric Point: 6.0921

>NTDB_id=588883 KXY09_RS04395 WP_012117114.1 878176..878967(+) (recX) [Bacillus velezensis strain LABIM44]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=588883 KXY09_RS04395 WP_012117114.1 878176..878967(+) (recX) [Bacillus velezensis strain LABIM44]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAGGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCTTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.468

100

0.795